Complete genome of BK virus, lineage IVb2
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External Database Hum_Polyoma BKV Reference sequence |
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Terms and conditions for distribution | In publishing the research results obtained by use of the BIOLOGICAL RESOURCE, a citation of literature(s) designated by the DEPOSITOR is requested. (J. Mol. Evol., 63, 341-352 (2006)) |
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Ordering | Please visit Information of Request for Distribution.[link] For for-profit-research purpose, please contact us. Order form [Credit Card Payment] [Bank Transfer Payment] Material Transfer Agreement (MTA for use for not-for-profit academic purpose) [Word] |
提供条件 | 利用者は、研究成果の公表にあたって寄託者の指定する文献を引用する (J. Mol. Evol., 63, 341-352 (2006))。 |
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提供依頼 | 手続きの詳細は、「提供申込みについて[link]」をご覧ください。営利目的利用についてはお問い合わせください。 提供依頼書 [Word] 提供同意書 (MTA、非営利機関による非営利学術研究用)[Word] |
Catalog # | Resource name | Shipping form | Fee (non-profit org.) |
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RDB07267 | pKOM-7 | DNA solution |
Materials & Methods section:
The pKOM-7 was provided by the RIKEN BRC through the National BioResource Project of the MEXT, Japan (cat. RDB07267). |
Reference section:
Further references such as user reports and related articles (go to bottom)
Featured content
RIKEN BRC has sequenced portions of this material for quality test.
Please review the QC test results indicated by icon as well as clone information before placing your order.
Test sheet | RDB07267_A8F5p1-2.pdf |
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Nucleotide sequence of a portion of this resource (if available).
Primer: reverse-2 (Pr0100) Region: insert 5' Sequence file: RDB07267_A8F5a.seq |
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>07267_07267_A8F5_1_Reverse2_C03_09_ABI24.ab1 1 AAACATCATT ACGCCAGCTT GCATGCCTGC AGGTCGACTC TAGAGGATCC CCCATTTCTG 61 GATTTAGAAA GCATTCTACT TCTGTTATAG CATCTACCCC AGTTTTAACT TCTAGAACTT 121 CTACTCCTCC TTTTATTAGT AGTTTTGGCA CTTGCACGGG TTCCTTTGGC TTTTTGGGAG 181 CTGCCCCTGG ACACTCTCCT TTTCTTTTGG TTGGGGCCAT CTTCATATGC TTCAAGAGCA 241 GGTGTTACAG TCCCGTACAG GCCTAGAAGC AAAGGCAACA TCCATTGAGG AGCAGTTCTT 301 TGATTAGCAC CTCCTGGGGC AATAGTTTTT TCTATAAACT CTCCTGAATG TACATTCTCC 361 TTATTTCTTA ACTCCATTCT TTGGGTAACT TCTTGTATAC TGTCAGCATC ATCTATTCTG 421 TAGGTATGGC CAAAATTTAC TTGGGTTCCT TCCCTTTCAG CAACTTGCCT AACCATTGAA 481 GGCCTAATAG GGGACAAATT AGAATAATAA TCCTGAATAT AATTATAAAA GTTTATAGGG 541 GCATTTACAA TTGTCCAGGT AGTTTCTTCC AAAAATCTAG CCAAGGAGTC TCTAAAGAAT 601 CTCTCTGTTC TTCTTTGCAA TTCTTGTGAA GTTATAGCAG GTATATCATC CCTAATAACA 661 TGCCACAAAG CCTGGGAAAT AGTAGCAAAC AAAGAAGGAC CCCAATGCCT AGGATCTAGG 721 TATTGAATAT TATTTACAAA AGTATTTACA CCAGGAAACA AAATATCATA GTACTCATCT 781 GGGTTAAACA ATTCCAATGC CATGCCTGAT TGCTGATAAA GGCCTACAGT GGAAACTTTG 841 TGATCCCAAT CACTAAAAAA ACCTATACCC TACTTGAGCC AAAGAACTAA TACCAGTAAC 901 AGTTTTGAAA TTAAAGCAGC AAACCCAGCA ATAGCCCCCT GGAGCACCAG CAATTACAGC 961 ATATGTTTTG AGGAGTTAGG CCTATAGCAG CTATAGCCTT CTGAGGTTAC TTGTTATGCC 1021 CTCTACAGTA GCAAGGGAAT GCATTTTGAC TTTCTTATAG CAGCAGCCAG GTCGTCCCCA 1081 AGCCAGCAAT TTTTCAAGGT CA // |
Primer: M13_-40 (Pr0410) Region: insert 3' Sequence file: RDB07267_A8F5b.seq |
>07267_07267_A8F5_1_M13_-40_D03_12_ABI24.ab1 1 CAGCGGGGGA ATTCGGAGCT CGGTACCGGG GATCCAGATA ATGACCTTAG GGGCTACAGT 61 CTAAGACTAA CTGCTGAAAC TGCCTTTGAC AGTGATAGCC CAGACAGAAA AATGCTTCCC 121 TGTTACAGCA CAGCAAGAAT TCCACTACCT AATTTGAATG AGGATCTAAC CTGTGGAAAT 181 CTACTAATGT GGGAGGCTGT GACTGTAAAA ACAGAGGTTA TGGGAATAAC TAGTATGCTT 241 AACCTTCATG CAGGGTCCCA GAAAGTACAT GAGAATGGTG GAGGCAAACC TATTCAAGGC 301 AGCAATTTTC ACTTTTTTGC TGTGGGTGGG GACCCCTTGG AAATGCAGGG AGTACTTATG 361 AACTACAGAA CAAAGTACCC AGAAGGTACT GTTACCCCAA AAAATCCCAC AGCTCAGTCC 421 CAGGTAATGA ATACTGACCA TAAGGCCTAC TTGGACAAAA ACAATGCTTA TCCAGTGGAA 481 TGCTGGATTC CTGACCCTAG TAGAAATGAA AATACTAGAT ATTTTGGAAC ATACACAGGA 541 GGGGAAAATG TTCCCCCAGT ACTTCATGTA ACCAACACAG CTACCACAGT GTTGCTGGAT 601 GAACAGGGTG TAGGGCCTCT GTGTAAAGCT GATAGCCTGT ATGTTTCAGC TGCTGATATT 661 TGTGGACTGT TTACTAACAG CTCTGGAACA CAACAGTGGA GGGGCCTTCC AAGATATTTT 721 AAGATTCGCC TGAGAAAAAG ATCTGTGAAG AACCCTTACC CAATTTCCTT TTTGCTTAGT 781 GACCTTATAA ACAGGAGAAC CCAGAGAGTG GATGGGCAGC CTATGTATGG TATGGAGTCT 841 CAGGTGGAGG AGGTCAGGGT GTTTGATGGC ACAGAACAGC TTCCAGGGGA CCCAGATATG 901 ATAAGATATA TTGACAGACA GGGACAATTG CAAACAAAAA ATGGTTTAAA CAAGGTGCTT 961 TTTATTGTAC ATATACATGC TTAATAAATG CTGCTTTTTA TATTACACAT TTTAATCTTT 1021 GTGTTATTTT TGGGGGTGGG TGGTTTTTAG GCCTTTTTAA AACACTGCAA GCGTTTTACA 1081 CGAATGTAAC CTTCTTTCCA ACTTTATTAT G // |
Primer: Bkvirus_F1 (Pr0564) Region: insert mid Sequence file: RDB07267_A8F5c.seq |
>07267_07267_A8F5_1_BKvirus_F1_F03_18_ABI24.ab1 1 ATGGGTCTGA TCTTCTTCTC TTGTTATATC AAGAATACAT TTTCCCATGC ATATATTATA 61 TTTCATCCTT GAAAAAGTAT ACATACTTAT CTCAGAATCC AGCCTTTCCT TCCATTCAAC 121 AATTCTAGAC TGTATATCTT GTGCAAAATC AGCTACAGGC CTGAACCAAA TTAGCAGTAG 181 CAACAAGGTC ATTCCACTTT GTAATATTCT TTTTTCAAGT AAAAATTCTG AGTTTTGCAG 241 GGATTTTCTT AAATAAATTT TAGGTCTAAA ATCTATCTGT CTTACAAATC TAGCCTGCAA 301 GGTTTTGGGG ACAGGATACT CATTCATTGT AACTAAACCT GGTGGAAATA TTTGGGTTCT 361 TTTGTTTAAG TGTTTCTTTT CTAAATTAAC TTTGACACTT CCATCTAAAT AATCCCTTAA 421 ACTGTCTAAA TTGTTTATTC CATGTCCTGA AGGCAAATCC TTTGATTCAG CTCCTGTTCC 481 CTTCACATCT TCAAAAACAA CCATATACTG ATCTATAGCC ACACCCAGTT CAAAAGTAAG 541 CCTTTCCATG GGTAAATTCA CATTTAAAGC TTTGCCTCCA CATAAATCTA ACAACCCTGC 601 AGCTAGTGTT GTTTTTCCAC TATCAATTGG ACCTTTGAAC AACCAGTATC TTCTTTTAGG 661 TACATTAAAA ACAATACAGT GCAGGAAATC AAATATAACA GAATCCATTT TAGGTAGCAA 721 ACAGTGCAGC CAGGCAACTC CTGCCATATA TTGTTCTAGT ACAGCATTTC CATGAGCTCC 781 AAATATTAAA TCCATTTTAT CTAATATATG ATTAAATCTG TCTGTTAGCA TTTCTTCTCT 841 GGTCATATGG AGGGTATCTA CCCTTTTTTT TAGCTAACAC TGTATCCACT GCTTGCTGAC 901 AAATACTTTT TTTGATTTTT TTACTTTCTG CAAAAAATGG TAGCATTTTG CAAAAATGCT 961 TTTTCATGAT AATTAAGGTG GTAGGTTGGT CTTTTTTTGA CACTTTTTAC ACTCGTCTAC 1021 ATGTACCTGA AAGTCTAAAT ACATAACCCC TAATTAGGTA // |
Please visit Sequencing and PCR primers for primer information.
Original, user report and related articles
original | Nishimoto, Y., Evolution of BK virus based on complete genome data. J. Mol. Evol., 63, 341-352 (2006). PMID 16897259. |
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2023.05.01
GNP_filter3_RDBDEP_html_230501.pl