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pMK280 (mCherry2-NeoR)

A plasmid for construction of C-terminal mCherry tagging donors.

Catalog number RDB13923
Resource name pMK280 (mCherry2-NeoR)
Alternative name mCherry2-NeoR, 970
Clone info. A plasmid for construction of C-terminal mCherry tagging donors. Please refer Fig. 4 of Natsume, T., Cell Reports 15, 210-218 (2016) for an instruction about how to use this clone. Please note that this plasmid does not contain the loxP sites, which are intended for removal of the marker.
Vector backbone pBluescriptII KS- (Plasmid)
Size of vector backbone 3.0 kb
Selectable markers Am^r
Gene/insert name Discosoma sp. RFP cDNA
Depositor|Developer Kanemaki, Masato |
Other clones in our bank

External Database
Discosoma sp. RFP

            Reference sequence
              
             

            Distribution information

            Please check terms and conditions set forth by the depositor, which are specified in the RIKEN BRC Catalog and/or Web Catalog.
            Terms and conditions for distribution In publishing the research results obtained by use of the BIOLOGICAL RESOURCE, a citation of the following literature designated by the DEPOSITOR is requested (Natsume, T., Cell Reports, 15: 210-218, 2016). This DNA clone is used for academic research purpose only. This is not to be used on a commercial basis. For use of this DNA clone except for internal academic research, the RECIPIENT must contact a NIG license representative at chizai@nig.ac.jp.
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            提供条件 利用者は、研究成果の公表にあたって寄託者の指定する文献を引用する (Natsume, T., Cell Reports, 15: 210-218, 2016)。学術研究にのみ限定、商業営利目的利用を禁ずる。学術内部利用以外の利用の際は、国立遺伝学研究所 (chizai@nig.ac.jp) に相談すること。
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            RDB13923 pMK280 (mCherry2-NeoR) DNA solution

            Please review the QC test results indicated by check icon below as well as clone information before placing your order.

            How to cite this biological resource

            Materials & Methods section:

            The pMK280 (mCherry2-NeoR) was provided by the RIKEN BRC through the National BioResource Project of the MEXT, Japan (cat. RDB13923).

            Reference section:

            Natsume, T., Kiyomitsu, T., Saga, Y., Kanemaki, M.T., Rapid protein depletion in human cells by auxin-inducible degron tagging with short homology donors. Cell Rep. 15 (1): 210-218 (2016). PMID 27052166. [link to RRC of NBRP]

            Further references such as user reports and related articles (go to bottom)


            Tips

            Featured content

            Featured content Auxin Inducible Degron (AID) System (English text)
            Featured content Auxin Inducible Degron (AID) System (Japanese text)
            Featured content Genome Editing (English text)
            Featured content Genome Editing (Japanese text)
            Featured content Bacteria host strains (en) (English text)
            Featured content Bacteria host strains (ja) (Japanese text)

            QC test results

            RIKEN BRC has sequenced portions of this material for quality test.
            Please review the QC test results indicated by check icon as well as clone information before placing your order.

            Test sheet RDB13923_A6B8p1-3.pdf check

            Nucleotide sequence of a portion of this resource (if available).

            Primer: M13_-40 (Pr0410)
            Region: T7 pro,insert 5' Linker (mCherry2 5')
            Sequence file: RDB13923_A6B8e.seq check
            >D03070A07_A6B8_1_M13(-40)_D02_11.ab1
                1 NNNNNNNNCN CNNNNNNGNN TNNCNATAGG GCGAATTGGA GCTCGGATCC GGTGCAGGCG
               61 CCGCTAGCAT GGTGAGCAAG GGCGAGGAGG ATAACATGGC CATCATCAAG GAGTTCATGC
              121 GCTTCAAGGT GCACATGGAG GGCTCCGTGA ACGGCCACGA GTTCGAGATC GAGGGCGAGG
              181 GCGAGGGCCG CCCCTACGAG GGCACCCAGA CCGCCAAGCT GAAGGTGACC AAGGGTGGCC
              241 CCCTGCCCTT CGCCTGGGAC ATCCTGTCCC CTCAGTTCAT GTACGGCTCC AAGGCCTACG
              301 TGAAGCACCC CGCCGACATC CCCGACTACT TGAAGCTGTC CTTCCCCGAG GGCTTCAATT
              361 GGGAGCGCGT GATGAACTTC GAGGACGGCG GCGTGGTGAC CGTGACCCAG GACTCCTCCC
              421 TGCAGGACGG CGAGTTCATC TACAAGGTGA AGCTGCGCGG CACCAACTTC CCCTCCGACG
              481 GCCCCGTAAT GCAGTGTCGT ACCATGGGCT GGGAGGCCTC CACTGAGCGG ATGTACCCCG
              541 AGGACGGCGC CCTGAAGGGC GAGATCAAGC AGAGGCTGAA GCTGAAGGAC GGCGGCCACT
              601 ACGACGCTGA GGTCAAGACC ACCTACAAGG CCAAGAAGCC CGTGCAGCTG CCCGGCGCCT
              661 ACAACGTCGA CATCAAGTTG GACATCCTTT CCCACAACGA GGACTACACN NNNNNNNNAA
              721 CAGTACGAAC GCGCCGAGGG CCGCCACTCC ACCGGCGGCA TGGACGAGCT GTACAAGTAA
              781 TCTAGATAAC TGATCATAAT CAGCCATACC ACATTTGTAG AGGTTTTACT TGCTTTAAAA
              841 AACCTCCCAC ACCTCCCCNN GAACCTGAAA CATAAAATGA ATGNAATTGT TGNTGNTNAC
              901 TTGNTTATTG NANCTTATAA TGNNTACNAN TAAAGCAATA GCATNNCAAA NTTNNNAAAT
              961 NANNCATTTT TTNCACTGNN NNCNANTNNT GGNTNNNNNN ANCTCNTNNN GNNNNNNNNN
            1021 N
            //
            Primer: M13R (Pr0160)
            Region: insert 3'(TK pA,NeoR_KanR 3')
            Sequence file: RDB13923_A6B8f.seq check
            >D03070A07_A6B8_1_M13R_D01_10.ab1
                1 NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNAAGCTGGG TACCGGGCCC CCCCTCGAGG
               61 GNNCCAACGA CCCAACACCG TGCGTTTTAT TCTGTCTTTT TATTGCCGTC ATAGCGCGGG
              121 TTCCTTCCGG TATTGTCTCC TTCCGTGTTT CAGTTAGCCT CCCCCTAGGG TGGGCGAAGA
              181 ACTCCAGCAT GAGATCCCCG CGCTGGAGGA TCATCCAGCC GGCGTCCCGG AAAACGATTC
              241 CGAAGCCCAA CCTTTCATAG AAGGCGGCGG TGGAATCGAA ATCTCGTGAT GGCAGGTTGG
              301 GCGTCGCTTG GTCGGTCATT TCGAACCCCA GAGTCCCGCT CAGAAGAACT CGTCAAGAAG
              361 GCGATAGAAG GCGATGCGCT GCGAATCGGG AGCGGCGATA CCGTAAAGCA CGAGGAAGCG
              421 GTCAGCCCAT TCGCCGCCAA GCTCTTCAGC AATATCACGG GTAGCCAACG CTATGTCCTG
              481 ATAGCGGTCC GCCACACCCA GCCGGCCACA GTCGATGAAT CCAGAAAAGC GGCCATTTTC
              541 CACCATGATA TTCGGCAAGC AGGCATCGCC ATGGGTCACG ACGAGATCCT CGCCGTCGGG
              601 CATGCTCGCC TTGAGCCTGG CGAACAGTTC GGCTGGCGCG AGCCCCTGAT GCTCTTCGTC
              661 CAGATCATCC TGATCGACAA GACCGGCTTC CATCCGAGTA CGTGCTCGCT CGATGCGATG
              721 TTTCGCTTGG TGGTCGAATG GGCAGGTAGC CGGATCAAGC GTATGCAGCC GCCGCATTGC
              781 ATCANCCATG ATGGATACTT TCTCGGCAGG AGCAANGTGA GATGACAGGA GATCCTGCCC
              841 NNGCACTTCG CCNNATANCA GCNAGTCCCT TCCCGCTTCN GTGANAACGT CNAGNNNNAG
              901 CTGCNNAAGG AANNGCCCGT CGNGGNCNNG CCACGATNNN NCNGCGCTGC CTNGTCTNGN
              961 NNTTTNATTC NNGGGNNCCN NNNNNGNNNN GNTCTTNNNN AAAAAANAAN NNGGNNNNNC
            1021 CNGNNNCNNA NNNCCNGNNN NNNNNNN
            //
            Primer: SV40polyA-R (Pr0109)
            Region: insert mid(mCherry2 3')
            Sequence file: RDB13923_A6B8g.seq check
            >D03070A07_A6B8_1_SV40polyA-R_G04_19.ab1
                1 NNNNNNNNNN NNNNNNNNNG NNNNCTCTNN NNNGTGGTAT GGCTGATTAT GATCAGTTAT
               61 CTAGATTACT TGTACAGCTC GTCCATGCCG CCGGTGGAGT GGCGGCCCTC GGCGCGTTCG
              121 TACTGTTCCA CGATGGTGTA GTCCTCGTTG TGGGAAAGGA TGTCCAACTT GATGTCGACG
              181 TTGTAGGCGC CGGGCAGCTG CACGGGCTTC TTGGCCTTGT AGGTGGTCTT GACCTCAGCG
              241 TCGTAGTGGC CGCCGTCCTT CAGCTTCAGC CTCTGCTTGA TCTCGCCCTT CAGGGCGCCG
              301 TCCTCGGGGT ACATCCGCTC AGTGGAGGCC TCCCAGCCCA TGGTACGACA CTGCATTACG
              361 GGGCCGTCGG AGGGGAAGTT GGTGCCGCGC AGCTTCACCT TGTAGATGAA CTCGCCGTCC
              421 TGCAGGGAGG AGTCCTGGGT CACGGTCACC ACGCCGCCGT CCTCGAAGTT CATCACGCGC
              481 TCCCAATTGA AGCCCTCGGG GAAGGACAGC TTCAAGTAGT CGGGGATGTC GGCGGGGTGC
              541 TTCACGTAGG CCTTGGAGCC GTACATGAAC TGAGGGGACA GGATGTCCCA GGCGAAGGGC
              601 AGGGGGCCAC CCTTGGTCAC CTTCAGCTTG GCGGTCTGGG TGCCCTCGTA GGGGCGGCCC
              661 TCGCCCTCGC CCTCGATCTC GAACTCNNGG CCGTTCACGG AGCCCTCCAT GTGCACCTTG
              721 AAGCGCATGA ACTCCTTGNN NGATGGCCAT GTTATCCTCC TCGCCCTTGC TCACCATGCT
              781 AGCGGCGCCT GCACCGGATC CGAGCTCCAA TTCGCCCTAT NNNTGAGTCN NNTTANNCGC
              841 GCTCACTGNN NNNCNTTTNA CANNGTCNTG NCTGGGNAAA ANNCNTGNNN TNNNNCNANN
              901 TTNANTCGNN NTGCANNNNN TNCCCCCTTT NGCCAGCTGG NNNNATNNNC NAANANGNCC
              961 NCANNGATNN NCCNTNCCNN NNNNNNGCNC NNCCNNNAAN GNNNNANNNN AAANNNNNNN
            1021 NNN
            //
            Primer: SV40pro_F_V2 (Pr0154)
            Region: insert mid(NeoR_KanR 5')
            Sequence file: RDB13923_A6B8h.seq check
            >D03070A07_A6B8_1_SV40pro_F_V2_B10_04.ab1
                1 NNNNNNNNNN NNNNGNNNNN NGCTTTTGNA AGNNCGNTCA AGAGANAGGN NGAGGNNCGT
               61 TTCGCATGAT TGAACAAGAT GGATTGCACG CAGGTTCTCC GGCCGCTTGG GTGGAGAGGC
              121 TATTCGGCTA TGACTGGGCA CAACAGACAA TCGGCTGCTC TGATGCCGCC GTGTTCCGGC
              181 TGTCAGCGCA GGGGCGCCCG GTTCTTTTTG TCAAGACCGA CCTGTCCGGT GCCCTGAATG
              241 AACTGCAAGA CGAGGCAGCG CGGCTATCGT GGCTGGCCAC GACGGGCGTT CCTTGCGCAG
              301 CTGTGCTCGA CGTTGTCACT GAAGCGGGAA GGGACTGGCT GCTATTGGGC GAAGTGCCGG
              361 GGCAGGATCT CCTGTCATCT CACCTTGCTC CTGCCGAGAA AGTATCCATC ATGGCTGATG
              421 CAATGCGGCG GCTGCATACG CTTGATCCGG CTACCTGCCC ATTCGACCAC CAAGCGAAAC
              481 ATCGCATCGA GCGAGCACGT ACTCGGATGG AAGCCGGTCT TGTCGATCAG GATGATCTGG
              541 ACGAAGAGCA TCAGGGGCTC GCGCCAGCCG AACTGTTCGC CAGGCTCAAG GCGAGCATGC
              601 CCGACGGCGA GGATCTCGTC GTGACCCATG GCGATGCCTG CTTGCCGAAT ATCATGGTGG
              661 AAAATGGCCG CTTTTCTGGA TTCATCGACT GTGGCCGGCT GGGTGTGGCG GANCGCTATC
              721 AGGACATAGC GTTGGCTACC CGTGATATTG CTGAAGAGCT TGGCGGCGAA TGGGCTGACC
              781 GCTTCCTCGT GCTTTACGGT ATCGCCGCTC CNGATTCGCA GCGCATCGCC TTCTATCGCC
              841 TTCTTGACGA NTTCTTCTGN NCGGGNCTCT GGGGGTTCGA AATGACCGAC NNAGCGACGC
              901 CCNACCNNNC NTCACGAGAT TNNGATTCCN CCGCCNCCTN NNATGAANNN NTNGGCTTNN
            961 NNANNNNNTT TCCGGGNNGC CNNNNNNNTN NTNCNNNCNN NNNNGGNNNN NNNNNN
            //

            Please visit Sequencing and PCR primers for primer information.


            References

            Original, user report and related articles

            original Natsume, T., Rapid protein depletion in human cells by auxin-inducible degron tagging with short homology donors. Cell Rep. 15 (1): 210-218 (2016). PMID 27052166. [link to RRC of NBRP]

            2024.03.26

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