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Please review the QC test results indicated by check icon below as well as clone information before placing your order.

pMRX-bsr-ss-EGFP-FM4

Retroviral expression vector of secretory form of EGFP fused with a conditional aggregation domain.

Catalog number RDB17364
Resource name pMRX-bsr-ss-EGFP-FM4
Clone info. Retroviral expression vector of EGFP tagged with the signal sequence from mouse calreticulin (ss) at its N-terminus and FM4 at its C terminus. FM4, 4 x mouse FK506 binding protein 1a (FKBP1A/FKBP12) mutant (Phe-to-Met substitution at amino acid position 37). See Fig. S4 of Hirano, S. et al., Autophagy, 12 (2):312-326, 2016.
Vector backbone pMRX-IRES-bsr (plasmid)
Selectable markers Amp^r (E. coli), Blasticidin^r (mammalian cells).
Gene/insert name mouse Calr cDNA mouse Fkbp1a cDNA
Depositor|Developer Fukuda, Mitsunori |
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External Database
mouse Calr mouse Fkbp1a

        Reference sequence
          
         

        Distribution information

        Please check terms and conditions set forth by the depositor, which are specified in the RIKEN BRC Catalog and/or Web Catalog.
        Terms and conditions for distribution In publishing the research results obtained by use of the BIOLOGICAL RESOURCE, a citation of literature designated by the DEPOSITOR is requested. (Hirano, S. et al. Autophagy 12, 312-326 (FM4), 2016); (Homma, Y. et al. J. Cell Biol., in press (doi: 10.1083/jcb.201810134), 2019)
        Additional terms and conditions:
        Regarding pMRX vector: In publishing the research results obtained by use of the BIOLOGICAL RESOURCE, a citation of literatures for pMX and pMRX vectors (Kitamura, T., Exp. Hematol. 31 (11): 1007-1014, 2003; Saitoh T., J. Biol. Chem. 278 (38): 36005-36012, 2003) is requested.
        Ordering Please visit Information of Request for Distribution.[link] 
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        Material Transfer Agreement (MTA for use for not-for-profit academic purpose) [Word]
        Remarks Remember that you will be working with samples containing infectious virus.
        提供案内 (日本国内) [open/close]

        提供条件 利用者は、研究成果の公表にあたって寄託者の指定する文献を引用する(Hirano, S. et al. Autophagy 12, 312-326 (FM4), 2016); (Homma, Y. et al. J. Cell Biol., in press (doi: 10.1083/jcb.201810134), 2019)。
        付加的提供条件:
        pMRXベクターについて:利用者は、研究成果の公表にあたって pMXならびにpMRXベクターの文献 (Kitamura, T., Exp. Hematol. 31 (11): 1007-1014, 2003; Saitoh T., J. Biol. Chem. 278 (38): 36005-36012, 2003) の引用を必要とする。
        提供依頼 手続きの詳細は、「提供申込みについて[link]」をご覧ください。
        提供依頼書 [Word]
        提供同意書 (MTA、非営利機関による非営利学術研究用)[Word]
        備考 このリソースはウイルス粒子産生用のため、取扱いに注意が必要です。

        Catalog # Resource name Shipping form Fee (non-profit org.)
        RDB17364 pMRX-bsr-ss-EGFP-FM4 DNA solution

        Please review the QC test results indicated by check icon below as well as clone information before placing your order.

        References and tips

        Original reference

        original Homma, Y., Comprehensive knockout analysis of the Rab family GTPases in epithelial cells. J. Cell Biol. 218 (6): 2035-2050 (2019). PMID 31072826.
        original Hirano, S., Differing susceptibility to autophagic degradation of two LC3-binding proteins: SQSTM1/p62 and TBC1D25/OATL1. Autophagy 12 (2): 312-326 (2016). PMID 26902585.

        Further references such as user reports and related articles (go to bottom)

        Featured content


        QC test results

        RIKEN BRC has sequenced portions of this material for quality test.
        Please review the QC test results indicated by check icon as well as clone information before placing your order.

        Test sheet RDB17364_A9Lgp1-1.pdf check

        Nucleotide sequence of a portion of this resource (if available).

        Primer: MMLV-pol_F (Pr0352)
        Region: pol region, SS, EGFP 5'
        Sequence file: RDB17364_A9Lga.seq check
        >D06377A8_A9Lg_1_MMLV-pol_F_A08_02_ABI24.ab1
            1 NNNNNNNNNN NNNNNNNNNG GNATCGCAGC TTGGNNACNC GCCGCCCACG TGAAGGCTGC
           61 CGACCCCGGG GGTGGACCAT CCTCTAGACT GCCGGATCTG CCACCATGCT CCTTTCGGTG
          121 CCGCTCCTGC TTGGCCTCCT CGGCCTGGCC GCCGCAAGAT CCATGGTGAG CAAGGGCGAG
          181 GAGCTGTTCA CCGGGGTGGT GCCCATCCTG GTCGAGCTGG ACGGCGACGT AAACGGCCAC
          241 AAGTTCAGCG TGTCCGGCGA GGGCGAGGGC GATGCCACCT ACGGCAAGCT GACCCTGAAG
          301 TTCATCTGCA CCACCGGCAA GCTGCCCGTG CCCTGGCCCA CCCTCGTGAC CACCCTGACC
          361 TACGGCGTGC AGTGCTTCAG CCGCTACCCC GACCACATGA AGCAGCACGA CTTCTTCAAG
          421 TCCGCCATGC CCGAAGGCTA CGTCCAGGAG CGCACCATCT TCTTCAAGGA CGACGGCAAC
          481 TACAAGACCC GCGCCGAGGT GAAGTTCGAG GGCGACACCC TGGTGAACCG CATCGAGCTG
          541 AAGGGCATCG ACTTCAAGGA GGACGGCAAC ATCCTGGGGC ACAAGCTGGA GTACAACTAC
          601 AACAGCCACA ACGTCTATAT CATGGCCGAC AAGCAGAAGA ACGGCATCAA GGTGAACTTC
          661 AAGATCCGCC ACAACATCGA GGACGGCAGC GTGCAGCTCG CCGACCACTA CCAGCAGAAC
          721 ACCCCCATCG GCGACGGCCC CGTGCTGCTG CCCGACAACC ACTACCTGAN CACCCAGTCC
          781 GCCCTGANCA AAGACCCCAA CGAGAAGCGC GATCACATGG TCCTGCTGGA NTTCGTGACC
          841 GCCGCCGGGN TCACTCTCGG CATGGACGAN CTGTACAANG GATCNNGANN GCANGNGGAG
          901 ANNNTCTCNN CTGGANNNGG GNGCACCNTN NCNNAAGCGC GGNCAGANNN GCNNNNNNCA
        961 CTACNCGGGN NNGNNNNNNN NNGGNAAGAA ANNNNNNNNN N
        //
        Primer: EGFP-C2 (Pr0402)
        Region: EGFP 3', FM(1), FM(2), FM(3)
        Sequence file: RDB17364_A9Lgb.seq check
        >D06377A8_A9Lg_1_EGFP-C2_F08_17_ABI24.ab1
            1 NNNNNNNNNN NNNNNCNNGN NCNCNTGGTC CTGCTGGANT TCGTGNCCGC CGCCGGGNTC
           61 ACTCTCGGCA TGGANGAGCT GTACAAGGGA TCCGGAGTGC AGGTGGAGAC CATCTCTCCT
          121 GGAGACGGGC GCACCTTCCC AAAGCGCGGC CAGACCTGCG TGGTGCACTA CACGGGGATG
          181 CTTGAAGATG GAAAGAAAAT GGATTCCTCT CGGGACAGAA ACAAGCCTTT TAAGTTTACA
          241 CTAGGCAAGC AGGAGGTGAT CCGAGGCTGG GAGGAAGGGG TAGCCCAGAT GAGTGTGGGT
          301 CAGAGAGCCA AACTGATAAT CTCCTCAGAC TATGCCTATG GAGCCACCGG GCACCCAGGC
          361 ATCATCCCAC CACATGCCAC TCTTGTTTTT GATGTGGAGC TTCTAAAACT GGAAGGAAGA
          421 TCCGGAGTGC AGGTGGAGAC CATCTCTCCT GGAGACGGGC GCACCTTCCC AAAGCGCGGC
          481 CAGACCTGCG TGGTGCACTA CACGGGGATG CTTGAAGATG GAAAGAAAAT GGATTCCTCT
          541 CGGGACAGAA ACAAGCCTTT TAAGTTTACA CTAGGCAAGC AGGAGGTGAT CCGAGGCTGG
          601 GAGGAAGGGG TAGCCCAGAT GAGTGTGGGT CAGAGAGCCA AACTGATAAT CTCCTCAGAC
          661 TATGCCTATG GAGCCACCGG GCACCCAGGC ATCATCCCAC CACATGCCAC TCTTGTTTTT
          721 GATGTGGAGC TTCTAAAACT GGAAGGAAGA TCCGGANTGC AGGTGGAGAN CATCTCTCCT
          781 GGAGACGGGC GCACCTTCCC NAAGCGCGGC CAGANCTGCG TGGTGCACTA CACGGGGNNG
          841 CTTGAAGATG GAAAGAAAAT GGATTCCTCT CGGGACAGAA ACAAGCCTTT TAAGTTTACA
          901 CTANGNNAGC AGGANGNGAT NCNANGNTGG GANGNNNGGG NANCCCAGAT GANTGNGGNN
          961 CANANANCCA AANTGANNNN CTNCNNCNNN NTATGNNNNT GGNNNNNNNN GNNNNNNNNN
        1021 N
        //
        Primer: IRES-R (Pr0037)
        Region: FM(4)
        Sequence file: RDB17364_A9Lgc.seq check
        >D06377A8_A9Lg_1_IRES-R_B08_05_ABI24.ab1
            1 NNNNNNNNNN NNNNNNNNNN ANGTNAGGGG GGGGGGGCGG AATTGNTCCC GCTAGAGGGA
           61 AACCGTTGCT AGCTTAAGTT AGTTAACAAT TGTTACCGCG GCCGCGAATT CACTAGTGAT
          121 TCTACGTCGA CCCTCCTTCC AGTTTTAGAA GCTCCACATC AAAAACAAGA GTGGCATGTG
          181 GTGGGATGAT GCCTGGGTGC CCGGTGGCTC CATAGGCATA GTCTGAGGAG ATTATCAGTT
          241 TGGCTCTCTG ACCCACACTC ATCTGGGCTA CCCCTTCCTC CCAGCCTCGG ATCACCTCCT
          301 GCTTGCCTAG NGTAAACTTA AAAGGCTTGT TTCTGTCCCG AGAGGAATCC ATTTTCTTTC
          361 CATCTTCAAG CATCCCCGTG TAGTGCACCA CGCAGGTCTG GCCGCGCTTT GGGAAGGTGC
          421 GCCCGTCTCC AGGANANATG GTCTCCACCT GCACTCCGGA TCTTCCTTCC AGTTTTANAA
          481 GCTCCACATC AAAAACAANA GTGGCATGTG GTGGGATGAT GCCTGGGTGC CCGGTGGCTC
          541 CATAGGCATA GTCTGAGGAG ATTATCAGTT TGGCTCTCTG ACCCACACTC ATCTGGGCTA
          601 CCCCTTCCTC CCANCCTCGG ATCACCTCCT GCTTGCCTAG TGTAAACTTA AAAGGCTTGT
          661 TTCTGTCCCG AGAGGAATCC ATTTTCTTTC CATCTTCAAG CATCCCCGTG TAGTGCACCA
          721 CGCAGGTCTG GCCGCGCTTT GGGAANGTGC GCCCGTCTCC AGGANAGANG GTCTCCACCT
          781 GCACTCCGGA TCTTCCTTCC AGTTTTANAA GCTCCACATC AAAAACAAGA NNGGCATGTG
          841 NNGGGNNGAN GCCNGGGNGC CCGGNGGCTC CNTAGGCNTA GNCNGNNGAN ATTATCAGTT
          901 TGNNTCTCTG ANCCACANTC NTCNGGGCTA CCCNNNCNNN CCNNNNNCNN NTNNNNNNCN
          961 GCTTGCNNAN NGNAAACTNN AAANNNNNTN NNTNNTGTCC NNNNNNGNNN NNNNNTTNNN
        1021 TTNNNNNNNN NN
        //
        Primer: IRES-F (Pr0036)
        Region: IRES, bsr, 3' LTR
        Sequence file: RDB17364_A9Lgd.seq check
        >D06377A8_A9Lg_1_IRES-F_C08_08_ABI24.ab1
            1 NNNNNNNNNN NNNTNNGTCG AGGNNNNNAA ACGTCTAGGC CCCCCGAACC ACGGGGANGT
           61 GGTTTTCCTT TGAAAAACAC GATAATACCA TGGTCATGAA AACATTTAAC ATTTCTCAAC
          121 AAGATCTAGA ATTAGTAGAA GTAGCGACAG AGAAGATTAC AATGCTTTAT GAGGATAATA
          181 AACATCATGT GGGAGCGGCA ATTCGTACGA AAACAGGAGA AATCATTTCG GCAGTACATA
          241 TTGAAGCGTA TATAGGACGA GTAACTGTTT GTGCAGAAGC CATTGCGATT GGTAGTGCAG
          301 TTTCGAATGG ACAAAAGGAT TTTGACACGA TTGTAGCTGT TAGACACCCT TATTCTGACG
          361 AAGTAGATAG AAGTATTCGA GTGGTAAGTC CTTGTGGTAT GTGTAGGGAG TTGATTTCAG
          421 ACTATGCACC AGATTGTTTT GTGTTAATAG AAATGAATGG CAAGTTAGTC AAAACTACGA
          481 TTGAAGAACT CATTCCACTC AAATATACCC GAAATTAAAA GTCGACGATA AAATAAAAGA
          541 TTTTATTTAG TCTCCAGAAA AAGGGGGGAA TGAAAGACCC CACCTGTAGG TTTGGCAAGC
          601 TAGCTTAAGT AACGCCATTT TGCAAGGCAT GGAAAAATAC ATAACTGAGA ATAGAGAAGT
          661 TCAGATCAAG GTCAGGAACA GATGGAACAG CTGAATATGG GCCAAACAGG ATATCTGTGG
          721 TAAGCAGTTC CTGCCCCGGC TCANGGCCAA GAACAGATGG AACAGCTGAA TATGGGCCAA
          781 ACAGGATATC TGTGGTAAGC AGTTCCTGNN NNGGCTCANG GCCNAGAACA GATGGTCNNC
          841 AGATGCGGTC CAGCCCTCAN CAGTTTCTAG AGAANCNTCA GANGTTTNCN GGGNGNCCCA
          901 AGGANNNNAA ATGANCNNGN GCCTTATTTG AACNNNNCNA TCANTTCGCT TCNCGCTNCN
        961 GNNCGCGNGC TNNNGNNNCC NNANCTNNNN AAAAGANCNN NNNNNNNN
        //
        Primer: CMV enh_F1 (Pr0652)
        Region: CMV en, 5' LTR, MMLV psi
        Sequence file: RDB17364_A9Lge.seq check
        >D06377A8_A9Lg_1_CMVenh_F1_D08_11_ABI24.ab1
            1 NNNNNNNNNN NNNNNNNNNN NNNNNTGNNC TTATGGGNNT TTCCTACTTG GCAGNNNNNN
           61 TACGTATTAG TCATCGCTAT TACCATGCTA GAGAACCATC AGATGTTTCC AGGGTGCCCC
          121 AAGGACCTGA AATGACCCTG TGCCTTATTT GAACTAACCA ATCAGTTCGC TTCTCGCTTC
          181 TGTTCGCGCG CTTCTGCTCC CCGAGCTCAA TAAAAGAGCC CACAACCCCT CACTCGGCGC
          241 GCCAGTCCTC CGATTGACTG AGTCGCCCGG GTACCCGTGT ATCCAATAAA CCCTCTTGCA
          301 GTTGCATCCG ACTTGTGGTC TCGCTGTTCC TTGGGAGGGT CTCCTCTGAG TGATTGACTA
          361 CCCGTCAGCG GGGGTCTTTC ATTTGGGGGC TCGTCCGGGA TCGGGAGACC CCTGCCCAGG
          421 GACCACCGAC CCACCACCGG GAGGTAAGCT GGCCAGCAAC TTATCTGTGT CTGTCCGANT
          481 GTCTAGTGTC TATGACTGAT TTTATGCGCC TGCGTCNGTA CTAGTTAGCT NACTAGCTCT
          541 GTATCTGGCG GANCCNNGGN GNAACTGANN ANTNNNGAAC ACCCGGNNNN NACCCTGGGA
          601 NANNTCCCNN GNNNNNNNGG GNNNNNTTTT NNGNNCCNAN NNNNNTNNNA AANNCNNATN
        661 NNTTNNNNNT NNTNNNNGNN CCCCCNNNNN NNNNN
        //

        Please visit Sequencing and PCR primers for primer information.


        References

        Original, user report and related articles

        original Homma, Y., Comprehensive knockout analysis of the Rab family GTPases in epithelial cells. J. Cell Biol. 218 (6): 2035-2050 (2019). PMID 31072826.
        original Hirano, S., Differing susceptibility to autophagic degradation of two LC3-binding proteins: SQSTM1/p62 and TBC1D25/OATL1. Autophagy 12 (2): 312-326 (2016). PMID 26902585.

        2023.04.06

        GNP_filter3_RDBDEP_html_230405.pl