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CS-CDF-EG-PRE-RfA

Backbone vector plasmid of shRNA expressing lentivirus construct by Gateway(R) cloning with GFP marker driven by EF-1 alpha promoter.

Catalog number RDB07722
Resource name CS-CDF-EG-PRE-RfA
Clone info. Backbone vector plasmid of shRNA expressing lentivirus construct by Gateway(R) cloning with GFP marker driven by EF-1 alpha promoter.
Comment Commonly requested with pENTR4-H1 (RDB04395) for generation of shRNA expression vector and with pCMV-VSV-G-RSV-Rev (RDB04393) and pCAG-HIVgp (RDB04394) for packaging. Please note that Zeo resistance marker is not included in the lentivirus produced from this vector.
Vector backbone CS-CDF-EG-PRE-RfA (Plasmid)
Selectable markers Please note that Zeo resistance marker is not included in the lentivirus produced from this vector. E. coli: Amp^r, Cm^r, ccdB.
Growth remarks Use DB3.1, ccdB Survival or equivalent to amplify this clone. 30 degC is fine.
Depositor|Developer Miyoshi, Hiroyuki |
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External Database

            Reference sequence
              
             
            Lentiviral plasmid list. [link]

            Distribution information

            Please check terms and conditions set forth by the depositor, which are specified in the RIKEN BRC Catalog and/or Web Catalog.
            Terms and conditions for distribution The availability of the BIOLOGICAL RESOURCE is limited to a RECIPIENT of a not-for profit institution for a not-for-profit academic purpose. The RECIPIENT agrees to expressly describe the late Dr. Hiroyuki Miyoshi as the Developer.
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            Material Transfer Agreement (MTA, for use for not-for-profit academic purpose)[Word]
            Remarks Remember that you will be working with samples containing infectious virus.
            Use Survival2 (Invitrogen) or equivalent to amplify this clone.
            提供案内 (日本国内) [open/close]

            提供条件 本件研究材料は、非営利機関の非営利学術研究に限って提供する。本件研究材料を利用した研究結果等を発表する際は、本件研究材料が故三好浩之博士により開発されたことを明示する。
            提供依頼 手続きの詳細は、「レンチウイルスベクターの提供申し込み」をご覧ください。
            提供依頼書 [Word]
            提供同意書 (非営利機関による非営利学術研究用)[Word]
            遺伝子組換え生物の受入れ確認書が必要です。当室にご請求ください。
            備考 このリソースはウイルス粒子産生用のため、取扱いに注意が必要です。
            このクローンの増殖にはSurvival2 (Invitrogen)あるいは同等の宿主を使用してください。

            Catalog # Resource name Shipping form Fee (non-profit org.)
            RDB07722 CS-CDF-EG-PRE-RfA DNA solution

            Ordering instruction of plasmids [in Japanese] [in English]
            Please review the QC test results indicated by check icon below as well as clone information before placing your order.

            How to cite this biological resource

            Materials & Methods section:

            The CS-CDF-EG-PRE-RfA was provided by the RIKEN BRC through the National BioResource Project of the MEXT, Japan (cat. RDB07722).

            Reference section:

            Further references such as user reports and related articles (go to bottom)


            References and tips

            Featured content

            Featured content Lentivirus Vector (English text)
            Featured content Lentivirus Vector (Japanese text)

            QC test results

            RIKEN BRC has sequenced portions of this material for quality test.
            Please review the QC test results indicated by check icon as well as clone information before placing your order.

            Test sheet RDB16922_A9Aop1.pdf check

            Nucleotide sequence of a portion of this resource (if available).

            Primer: EF1a-_C_F
            Sequence file: RDB16922_A9Aoa.seq check
            >07722_16922_A9Ao_7_EF1a-_C_F_A06_01_ABI08.ab1
                1 TTTCTTGGGG AATTTGCCTT TTTGAGTTTG GATCTTGGTT CATTCTCAAG CCTCAGACAG
               61 TGGTTCAAAG TTTTTTTCTT CCATTTCAGG TGTCGTGAAC ACGCTACCGG TCGCCACCAT
              121 GGTGAGCAAG GGCGAGGAGC TGTTCACCGG GGTGGTGCCC ATCCTGGTCG AGCTGGACGG
              181 CGACGTAAAC GGCCACAAGT TCAGCGTGTC CGGCGAGGGC GAGGGCGATG CCACCTACGG
              241 CAAGCTGACC CTGAAGTTCA TCTGCACCAC CGGCAAGCTG CCCGTGCCCT GGCCCACCCT
              301 CGTGACCACC CTGACCTACG GCGTGCAGTG CTTCAGCCGC TACCCCGACC ACATGAAGCA
              361 GCACGACTTC TTCAAGTCCG CCATGCCCGA AGGCTACGTC CAGGAGCGCA CCATCTTCTT
              421 CAAGGACGAC GGCAACTACA AGACCCGCGC CGAGGTGAAG TTCGAGGGCG ACACCCTGGT
              481 GAACCGCATC GAGCTGAAGG GCATCGACTT CAAGGAGGAC GGCAACATCC TGGGGCACAA
              541 GCTGGAGTAC AACTACAACA GCCACAACGT CTATATCATG GCCGACAAGC AGAAGAACGG
              601 CATCAAGGTG AACTTCAAGA TCCGCCACAA CATCGAGGAC GGCAGCGTGC AGCTCGCCGA
              661 CCACTACCAG CAGAACACCC CCATCGGCGA CGGCCCCGTG CTGCTGCCCG ACAACCACTA
              721 CCTGAGCACC CAGTCCGCCC TGAGCAAAGA CCCCAACGAG AAGCGCGATC ACATGGTCCT
              781 GCTGGAGTTC GTGACCGCCG CCGGGATCAC TCTCGGCATG GACGAGCTGT ACAAGTCCGG
              841 ACTCAGATCC TACTAGTAGG ATCTCGAGGG ATCAAGCTTA TCGATAATCA ACCTCTGGAT
              901 TACAAAATTT GTGAAAGATT GACTGGTATT CTTAACTATG TTGCTCCTTT TACGCTATGT
              961 GGATACGCTG CTTTAATGCC TTTGTATCAT GCTATTGCTT CCCGTATGGC TTTCATTTTC
             1021 TCCTCCTTGT ATAAATCCTG GTTGCTGTCT CTTTATGAGG AGTTGTGGCC CGTTGTCAGC
             1081 AACGTGCGTG GTGTGCACTG TGTTGCTGGA CGCAAACCCC CCACTGGGTT GGGCATTGCA
            1141 ACCACTGGTC AGCTCCTTTT CCGAACTTCG CATTTTCCCC TCCCTATTGG CCCACCGAC
            //
            Primer: Cm-M_R
            Sequence file: RDB16922_A9Aob.seq check
            >07722_16922_A9Ao_7_Cm-M_R_B06_02_ABI08.ab1
                1 GGCTTGGGGT GAACTATCCC ATATCACCAG CTCACCGTCT TTCATTGCCA TACGGAATTC
               61 CGGATGAGCA TTCATCAGGC GGGCAAGAAT GTGAATAAAG GCCGGATAAA ACTTGTGCTT
              121 ATTTTTCTTT ACGGTCTTTA AAAAGGCCGT AATATCCAGC TGAACGGTCT GGTTATAGGT
              181 ACATTGAGCA ACTGACTGAA ATGCCTCAAA ATGTTCTTTA CGATGCCATT GGGATATATC
              241 AACGGTGGTA TATCCAGTGA TTTTTTTCTC CATTTTAGCT TCCTTAGCTC CTGAAAATCT
              301 CGACGGATCC TAACTCAAAA TCCACACATT ATACGAGCCG GAAGCATAAA GTGTAAAGCC
              361 TGGGGTGCCT AATGCGGCCG CCATAGTGAC TGGATATGTT GTGTTTTACA GTATTATGTA
              421 GTCTGTTTTT TATGCAAAAT CTAATTTAAT ATATTGATAT TTATATCATT TTACGTTTCT
              481 CGTTCAGCTT TTTTGTACAA ACTTGTGATA TCTTGTCTTC GTTGGGAGTG AATTAGCCCT
              541 TCCAGTCCCC CCTTTTCTTT TAAAAAGTGG CTAAGATCTA CAGCTGCCTT GTAAGTCATT
              601 GGTCTTAAAG GTACCTGAGG TGTGACTGGA AAACCCACCT CCTCCTCCTC TTGTGCTTCT
              661 AGCCAGGCAC AATCAGCATT GGTAGCTGCT GTATTGCTAC TTGTGATTGC TCCATGTTTT
              721 TCTAGGTCTC GACGGTATCG ATGCGGGGAG GCGGCCCAAA GGGAGATCCG ACTCGTCTGA
              781 GGGCGAAGGC GAAGACGCGG AAGAGGCCGC AGAGCCGGCA GCAGGCCGCG GGAAGGAAGG
              841 TCCGCTGGAT TGAGGGCCGA AGGGACGTAG CAGAAGGACG TCCCGCGCAG AAATCCAGGT
              901 GGCAACCACA GGCGAGCAGC CATGGGAAAG GACGTCAGCT TCCCTCGACA ACACCACGGG
              961 AATTGTCAGT GGCCCAACAG CCGAGCCCCC TGTCCAGCAG CGGGGCAGGC AAGCGGCGAT
             1021 GAGTTCGCCG TGGCATAGGG GAGGGGGGAA AGCGAAAGTC CCGGAAGGGA GCTGACAGGT
             1081 GGTGGCAATG CTCCAACCAG TGGGGGTGCC GTCACCAAAC CAGTGCAACC ACGGCACGTT
             1141 GGCCTGACAA CGTGCACAAC CTCCTCATAA AGAGACAAGC CACCAGGAAT TTATCCAGGG
            1201 AGGGACAAAG TGAAGAGTGC GTGCTGGGTA GGTCAT
            //
            Primer: BGH_rev
            Sequence file: RDB16922_A9Aoc.seq check
            >07722_16922_A9Ao_7_BGH_rev_C06_03_ABI08.ab1
                1 CCTTAAAAGG GGGGCCTGCT AGAGATTTTC CACACTGACT AAAAGGGTCT GAGGGATCTC
               61 TAGTTACCAG AGTCACACAA CAGACGGGCA CACACTACTT GAAGCACTCA AGGCAAGCTT
              121 TATTGAGGCT TAAGCAGTGG GTTCCCTAGT TAGCCAGAGA GCTCCCAGGC TCAGATCTGG
              181 TCTAACCAGA GAGACCCAGT ACAGTCCGGA TGCAGCTCTC GGGCCATGTG ATGAAATGCT
              241 AGGCGGCTGT CAAACCTCCA CTCTAATACT TCTCTCTCCG GGTCATCCAT CCCATGCAGG
              301 CTCACAGGGT GTAACAAGCG GGTGTTCTCT CCTTCATTGG CTTCTTCTAC CTTCTCTTGC
              361 TCAACTGGTA CTAGCTTGTA GCACCATCCA AAGGTCAGTG GATATCACCA CTTTGTACAA
              421 GAAAGCTGAA CGAGAAACGT AAAATGATAT AAATATCAAT ATATTAAATT AGATTTTGCA
              481 TAAAAAACAG ACTACATAAT ACTGTAAAAC ACAACATATC CAGTCACTAT GGTCGACCTG
              541 CAGACTGGCT GTGTATAAGG GAGCCTGACA TTTATATTCC CCAGAACATC AGGTTAATGG
              601 CGTTTTTGAT GTCATTTTCG CGGTGGCTGA GATCAGCCAC TTCTTCCCCG ATAACGGAGA
              661 CCGGCACACT GGCCATATCG GTGGTCATCA TGCGCCAGCT TTCATCCCCG ATATGCACCA
              721 CCGGGTAAAG TTCACGGGAG ACTTTATCTG ACAGCAGACG TGCACTGGGC CAGGGGGATC
              781 ACCATCCGTC GCCCGGGCGT GTCAATAAAT ATCACTCTGT ACATCCACAA ACAGACGATA
              841 ACGGGCTCTC TCTTTTATAG GTGTAAACCT TTAAACTGCA TTTCACCAGC CCCTGTTCTC
              901 GTCAGCAAAG AGCCGTTCAT TTCAATAAAA CCGGGCGACC TCAGCCCATC CCTTCCTGAT
              961 TTCCGCTTTC CAGCGTTCGG CACGCAGACG ACGGGCTTTC ATTCTGCCAT GGTTGTGCTT
             1021 ACCCAGACCG GAGAATATTG ACATTCATAT ATTGCCCTTG AGCACTGGAT AGCCTGTCGC
             1081 TGTCCAACTG TACACTGTAA TACCGCTTGC TTCAATAGCA ATACCCTCCT TTTTGACCAT
             1141 ACTTCGGGGT ATACATAATC CAGGTATTAT AATTCTTATT AGCGCGCCAA AAAATTCGAG
             1201 CGCGGCGCCA ATTACGCGCA TAACTGGTTT ATCTCTGGGG GCCTTTTGTA GAAGTTAAAC
            1261 GCAGCCAGCA G
            //
            Primer: CMV-Forward
            Sequence file: RDB16922_A9Aod.seq check
            >07722_16922_A9Ao_7_CMV-Forward_D06_04_ABI08.ab1
                1 GCGGTCAACC TCCGGCCCAT TGACGCAAAT GGGCGGTAGG CGTGTACGGT GGGAGGTCTA
               61 TATAAGCAGC GCGTTTTGCC TGTACTGGGT CTCTCTGGTT AGACCAGATC TGAGCCTGGG
              121 AGCTCTCTGG CTAACTAGGG AACCCACTGC TTAAGCCTCA ATAAAGCTTG CCTTGAGTGC
              181 TTCAAGTAGT GTGTGCCCGT CTGTTGTGTG ACTCTGGTAA CTAGAGATCC CTCAGACCCT
              241 TTTAGTCAGT GTGGAAAATC TCTAGCAGTG GCGCCCGAAC AGGGACTTGA AAGCGAAAGG
              301 GAAACCAGAG GAGCTCTCTC GACGCAGGAC TCGGCTTGCT GAAGCGCGCA CGGCAAGAGG
              361 CGAGGGGCGG CGACTGGTGA GTACGCCAAA AATTTTGACT AGCGGAGGCT AGAAGGAGAG
              421 AGATGGGGCG AGAGCGTCGT ATTAGCGGGG GAAATTAATC GCGATGGGAA AAATCGGTAG
              481 GGCAGGGGAA AAAAAATATA ATTAAACTAT AGTATGGCCA GCCGGGAGCA GAACGATTGC
              541 GTTAACCTGG CCGGTAAACC ACCAAAGGGT TAACAAATTT GGGAAGTAAC AACTCCCTTC
              601 AAAGGGCAAA AAAATTTATT TTTTTTTAAA ACCGGGCCCC CCCCTTTTTT GGGGGGCCCA
              661 AGGGGGAAAA AAAAAAAAAC CCCCCGGGGG TTTTTTTTCC CCATTTTGGG GGAAAGCAAA
              721 CCCATTTAAA CCCCCCCCCA AAAAAGGGGG CGCCCTTTTT TTTTTAATTT GGGGGGGGGG
              781 AAATTTGGGG GGCCATTTTG GGAAAGAATT TTTTTTTAAT ATTAAAAGGG AAAAATTGTC
              841 CCCCTTGGGG GGGCCCCCCC CCCCCCGGAA AAAAAAAAAA AGGGGGAAAA AAAAAAAAAA
              901 AGGGGGGGAA AAAGGGTTTT TTCTTTGGTG TGTGGGGGAA AAAAAAAAAA TTTGGGGGGG
              961 CATAAAATTA ACACAAGAGA GAGAAACAAA ATAAAAATGG GGGGGGGGAG TGCGCCAAAA
            1021 AAATTTTTTT TGGGTGTTTT TTGTAGGGGC ACCCCCCTCT TCTTT
            //
            Primer: SV40pro_F
            Sequence file: RDB16922_A9Aoe.seq check
            >07722_16922_A9Ao_7_SV40pro_F_E06_05_ABI08.ab1
                1 CCCTGGCCCT GGACCTTTTC AGAAGTAGTG AGGAGGCTTT TTTGGAGGCC TAGGCTTTTG
               61 CAAAAAGCTC CCGGGAGCTT GTATATCCAT TTTCGGATCT GATCAGCACG TGTTGACAAT
              121 TAATCATCGG CATAGTATAT CGGCATAGTA TAATACGACA AGGTGAGGAA CTAAACCATG
              181 GCCAAGTTGA CCAGTGCCGT TCCGGTGCTC ACCGCGCGCG ACGTCGCCGG AGCGGTCGAG
              241 TTCTGGACCG ACCGGCTCGG GTTCTCCCGG GACTTCGTGG AGGACGACTT CGCCGGTGTG
              301 GTCCGGGACG ACGTGACCCT GTTCATCAGC GCGGTCCAGG ACCAGGTGGT GCCGGACAAC
              361 ACCCTGGCCT GGGTGTGGGT GCGCGGCCTG GACGAGCTGT ACGCCGAGTG GTCGGAGGTC
              421 GTGTCCACGA ACTTCCGGGA CGCCTCCGGG CCGGCCATGA CCGAGATCGG CGAGCAGCCG
              481 TGGGGGCGGG AGTTCGCCCT GCGCGACCCG GCCGGCAACT GCGTGCACTT CGTGGCCGAG
              541 GAGCAGGACT GACACGTGCT ACGAGATTTC GATTCCACCG CCGCCTTCTA TGAAAGGTTG
              601 GGCTTCGGAA TCGTTTTCCG GGACGCCGGC TGGATGATCC TCCAGCGCGG GGATCTCATG
              661 CTGGAGTTCT TCGCCCACCC CAACTTGTTT ATTGCAGCTT ATAATGGTTA CAAATAAAGC
              721 AATAGCATCA CAAATTTCAC AAATAAAGCA TTTTTTTCAC TGCATTCTAG TTGTGGTTTG
              781 TCCAAACTCA TCAATGTATC TTATCATGTC TGTATACCGT CGACCCTCTA GCTAGAGCTT
              841 TGGCGTAATC ATGGTCATAG CTGTTTCCTG TGTGAAATTG TTATCCGCTC ACAATTCCAC
              901 ACAACATACG AGCCGGGAAG CATAAAGTGT AAAGCCTGGG GTGCCTAATG AGTGAGCTAA
              961 CTCACATTAA TTGCGTTGCG CTCACTGCCC GCTTTCCAAG TCGGGAAACC TGTCGTGGCA
             1021 GGCTGCCATT AAATGGAATC GGGCCAAACG CCGCGGGGAA GAGGCGGTTT GCCGTAATGG
             1081 GGCGCTTCTT CCGCTTCCCT CGCTCACTGA CTCCGCTGCC GCTCGGTCCG TTCGGCTTGC
             1141 GGGCGTAGCG GTATACCAGC CTCACTTCAA AAGGGCGTTA ATACGGGTCA TCCCACGGAA
            1201 TTCAGGGATA CCGCAGGGAA AGAAACCATG TGTGAAGCTC AACAT
            //
            Primer: EF1a-N_R
            Sequence file: RDB16922_A9Aof.seq check
            >07722_16922_A9Ao_7_EF1a-N_R_B07_02_ABI08.ab1
                1 TCCCCGGGGG GGGAATGTGG GCGATGTGCG CTCTGCCCAC TGACGGGCAC CGGAGCCTCA
               61 CGAAGCTTGA ATTCAAAGTG AATTTCTGCT GTCCCTGTAA TAAACCCGAA AATTTTGAAT
              121 TTTTGTAATT TGTTTTTGTA ATTCTTTAGT TTGTATGTCT GTTGCTATTA TGTCTACTAT
              181 TCTTTCCCCT GCACTGTACC CCCCAATCCC CCCTTTTCTT TTAAAATTGT GGATGAATAC
              241 TGCCATTTGT AGATCCGTTC ACTAATCGAA TGGATCTGTC TCTGTCTCTC TCTCCACCTT
              301 CTTCTTCTAT TCCTTCGGGC CTGTCGGGTC CCCTCGGGGT TGGGAGGTGG GTCTGAAACG
              361 ATAATGGTGA ATATCCCTGC CTAACTCTAT TCACTATAGA AAGTACAGCA AAAACTATTC
              421 TTAAACCTAC CAAGCCTCCT ACTATCATTA TGAATAATTT TATATACCAC AGCCAATTTG
              481 TTATGTTAAA CCAATTCCAC AAACTTGCCC ATTTATCTAA TTCCAATAAT TCTTGTTCAT
              541 TCTTTTCTTG CTGGTTTTGC GATTCTTCAA TTAAGGAGTG TATTAAGCTT GTGTAATTGT
              601 TAATTTCTCT GTCCCACTCC ATCCAGGTCG TGTGATTCCA AATCTGTTCC AGAGATTTAT
              661 TACTCCAACT AGCATTCCAA GGCACAGCAG TGGTGCAAAT GAGTTTTCCA GAGCAACCCC
              721 AAATCCCCAG GAGCTGTTGA TCCTTTAGGT ATCTTTCCAC AGCCAGGATT CTTGCCTGGA
              781 GCTGCTTGAT GCCCCAGACT GTGAGTTGCA ACAGATGCTG TTGCGCCTCA ATAGCCCTCA
              841 ACAAATTGTT CTGCTGCTTG CACTATACCA GACAATAATT GTCTGGGCCT GTACCGTCAG
              901 CGTCATTGAC GCCTGCGCCC ATAGTGCTTC CTTGCTGCTT CCCAAGAAAC CCAAGGAACA
              961 AGCTCCTATT CCCACTGCTC TTTTTTTCTC TCTGCACCAT CTTCTCTTGG CTTGGGTGGG
            1021 GTGGCTACTT CAATGGGTTC AATTTTTTAC TACCTTCTTG TTTTATATAA ATTC
            //

            Please visit Sequencing and PCR primers for primer information.


            References

            Original, user report and related articles

            user_report Kusakari, S., Shp2 in forebrain neurons regulates synaptic plasticity, locomotion, and memory formation in mice. Mol. Cell. Biol. 35 (9): 1557-1572 (2015). PMID 25713104.
            user_report Maruyama, T., Hypothermia-induced tyrosine phosphorylation of SIRP alpha in the brain. J. Neurochem., 121 (6): 891-902 (2012). PMID 22468987.

            2023.05.02

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