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CS-UbC-RfA-IRES2-hKO1

Backbone vector plasmid of lentivirus construct driven by UbC promoter by Gateway(R) cloning with hKO1 fluorescent protein marker.

Catalog number RDB08350
Resource name CS-UbC-RfA-IRES2-hKO1
Clone info. Backbone vector plasmid of lentivirus construct driven by UbC promoter by Gateway(R) cloning with hKO1 fluorescent protein marker.
Comment Commonly requested with pCMV-VSV-G-RSV-Rev (RDB04393) and pCAG-HIVgp (RDB04394).
Vector backbone CS-UbC-RfA-IRES2-hKO1 (Plasmid)
Selectable markers Ampicillin, Chloramphenicol, ccdB (E. coli). Please note that Zeo resistance marker is not included in the lentivirus produced from this vector.
Growth remarks Use DB3.1, ccdB Survival or equivalent to amplify this clone. 30 degC is fine.
Depositor|Developer Miyoshi, Hiroyuki |
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External Database

            Reference sequence
              
             
            Sequence RDB08350z.seq
            Remarks, protocol and/or map (pdf) RDB08350.pdf

            Distribution information

            Please check terms and conditions set forth by the depositor, which are specified in the RIKEN BRC Catalog and/or Web Catalog.
            Terms and conditions for distribution The availability of the BIOLOGICAL RESOURCE is limited to a RECIPIENT of a not-for profit institution for a not-for-profit academic purpose. The RECIPIENT agrees to expressly describe the late Dr. Hiroyuki Miyoshi as the Developer.
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            Remarks Remember that you will be working with samples containing infectious virus.
            Use Survival2 (Invitrogen) or equivalent to amplify this clone.
            提供案内 (日本国内) [open/close]

            提供条件 本件研究材料は、非営利機関の非営利学術研究に限って提供する。本件研究材料を利用した研究結果等を発表する際は、本件研究材料が故三好浩之博士により開発されたことを明示する。
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            提供依頼書 [Word]
            提供同意書 (MTA, 非営利学術目的用)[Word]
            遺伝子組換え生物の受入れ確認書が必要です。当室にご請求ください。
            手続きの概要は、「レンチウイルスベクターの提供申し込み」をご覧ください。
            備考 このリソースはウイルス粒子産生用のため、取扱いに注意が必要です。
            このクローンの増殖にはSurvival2 (Invitrogen)あるいは同等の宿主を使用してください。

            Catalog # Resource name Shipping form Fee (non-profit org.)
            RDB08350 CS-UbC-RfA-IRES2-hKO1 DNA solution

            Ordering instruction of plasmids [in Japanese] [in English]
            Please review the QC test results indicated by check icon below as well as clone information before placing your order.

            How to cite this biological resource

            Materials & Methods section:

            The CS-UbC-RfA-IRES2-hKO1 was provided by the RIKEN BRC through the National BioResource Project of the MEXT, Japan (cat. RDB08350).

            Reference section:

            Further references such as user reports and related articles (go to bottom)


            Tips

            Featured content

            Featured content Lentiviral plasmid list (English text)
            Featured content Lentivirus Vector (English text)
            Featured content Lentivirus Vector (Japanese text)

            QC test results

            RIKEN BRC has sequenced portions of this material for quality test.
            Please review the QC test results indicated by check icon as well as clone information before placing your order.

            Test sheet RDB14535_A7Ajp1-3.pdf check

            Nucleotide sequence of a portion of this resource (if available).

            Primer: UbCpro_F (Pr0158)
            Region: UbC pro,attR1,CmR
            Sequence file: RDB14535_A7Aja.seq check
            >08350_14535_A7Aj_1_UbCpro_F_A07_01_ABI24.ab1
                1 AGCTTGTATT TTCAGTGTTA GACTAGTAAA TTGTCCGCTA AATTCTGGCC GTTTTTGGCT
               61 TTTTTGTTAG ACCGGACCGT GTTTAGCGCT ACCGGTCTCG AGAATTCTGC AGCGGCCATC
              121 ACAAGTTTGT ACAAAAAAGC TGAACGAGAA ACGTAAAATG ATATAAATAT CAATATATTA
              181 AATTAGATTT TGCATAAAAA ACAGACTACA TAATACTGTA AAACACAACA TATCCAGTCA
              241 CTATGGCGGC CGCATTAGGC ACCCCAGGCT TTACACTTTA TGCTTCCGGC TCGTATAATG
              301 TGTGGATTTT GAGTTAGGAT CCGTCGAGAT TTTCAGGAGC TAAGGAAGCT AAAATGGAGA
              361 AAAAAATCAC TGGATATACC ACCGTTGATA TATCCCAATG GCATCGTAAA GAACATTTTG
              421 AGGCATTTCA GTCAGTTGCT CAATGTACCT ATAACCAGAC CGTTCAGCTG GATATTACGG
              481 CCTTTTTAAA GACCGTAAAG AAAAATAAGC ACAAGTTTTA TCCGGCCTTT ATTCACATTC
              541 TTGCCCGCCT GATGAATGCT CATCCGGAAT TCCGTATGGC AATGAAAGAC GGTGAGCTGG
              601 TGATATGGGA TAGTGTTCAC CCTTGTTACA CCGTTTTCCA TGAGCAAACT GAAACGTTTT
              661 CATCGCTCTG GAGTGAATAC CACGACGATT TCCGGCAGTT TCTACACATA TATTCGCAAG
              721 ATGTGGCGTG TTACGGTGAA AACCTGGCCT ATTTCCCTAA AGGGTTTATT GAGAATATGT
              781 TTTTCGTCTC AGCCAATCCC TGGGTGAGTT TCACCAGTTT TGATTTAAAC GTGGCCAATA
              841 TGGACAACTT CTTCGCCCCC GTTTTTCACC ATGGGCAAAT ATTATACGCA AGGCGACAAG
              901 GTGCTGATGC CGCTGGCGAT TCAGTTCATC ATGCCGTTTG TGATGGCTTC CATGTCGGCA
              961 GAATGCTTAA TGAATTACAA CAGTACTGCG ATGAGTGGGC AGGCGGGGCG TAAACGCGTG
             1021 GATCCCGGCT TACTAAAAAG CCAGATACAG TATGCGTATT TTGCGCGCTG ATTTTTTGCG
             1081 GTATAAGATA TATACTGATA TGTATACCGG AAGTATGGTC AAAAAGGAGG GTAATGCCTA
            //
            Primer: IRES-R (Pr0037)
            Region: IRES2,attR2,ccdB
            Sequence file: RDB14535_A7Ajb.seq check
            >08350_14535_A7Aj_IRES-R_G10_07_ABI08.ab1
                1 GGCATCGCGG CCTTCGGCAG TACGTTAGGG GGGGGGGAGG GAGAGGGGCG GATCCGCGGC
               61 CATCACCACT TTGTACAAGA AAGCTGAACG AGAAACGTAA AATGATATAA ATATCAATAT
              121 ATTAAATTAG ATTTTGCATA AAAAACAGAC TACATAATAC TGTAAAACAC AACATATCCA
              181 GTCACTATGG TCGACCTGCA GACTGGCTGT GTATAAGGGA GCCTGACATT TATATTCCCC
              241 AGAACATCAG GTTAATGGCG TTTTTGATGT CATTTTCGCG GTGGCTGAGA TCAGCCACTT
              301 CTTCCCCGAT AACGGAGACC GGCACACTGG CCATATCGGT GGTCATCATG CGCCAGCTTT
              361 CATCCCCGAT ATGCACCACC GGGTAAAGTT CACGGGAGAC TTTATCTGAC AGCAGACGTG
              421 CACTGGCCAG GGGGATCACC ATCCGTCGCC CGGGCGTGTC AATAATATCA CTCTGTACAT
              481 CCACAAACAG ACGATAACGG CTCTCTCTTT TATAGGTGTA AACCTTAAAC TGCATTTCAC
              541 CAGCCCCTGT TCTCGTCAGC AAAAGAGCCG TTCATTTCAA TAAACCGGGC GACCTCAGCC
              601 ATCCCTTCCT GATTTTCCGC TTTCCAGCGT TCGGCACGCA GACGACGGGC TTCATTCTGC
              661 ATGGTTGTGC TTACCAGACC GGAGATATTG ACATCATATA TGCCTTGAGC AACTGATAGC
              721 TGTCGCTGTC AACTGTCACT GTAATACGCT GCTTCATAGC ATACCTCTTT TTGACATACT
              781 TCGGGTATAC ATATCAGTAT ATATTCTTAT ACCGCAAAAA TCAGCGCGCA AATACGCATA
              841 CTGTTATCTG GGCTTTTAGT AAGCCGGATC CACGCGTTTA CGCCAGCCGC CCCTGCCACT
              901 CATCGCAGTA CTGTTTGTAA ATTCATTTAA AGCATTTCTG CCCGACATGG GAAAGCCCAA
              961 TCACAAACGG GCCATGGATT GAAACCTGGA AATCGCCAGC GGGCATCAGC ACCCTTTGGT
             1021 CCGCCCTTGC GTATAAATAT TTTGGCCCCA ATGGATGGAA AAAACGGGGG GGGGCCGGAA
            1081 AGGAAAGGAT GC
            //
            Primer: IRES-F (Pr0036)
            Region: IRES2,hKO,PRE
            Sequence file: RDB14535_A7Ajc.seq check
            >08350_14535_A7Aj_1_IRES-F_G07_19_ABI24.ab1
                1 GCGAAGCCTT TAAAATGGTG TTTAGTCGGA GGTTAAAAAA ACGTCTAGGC CCCCCGAACC
               61 ACGGGGACGT GGTTTTCCTT TGAAAAACAC GATGATAATA TGGCCACGGG GATCCCCACC
              121 ATGGTGAGCG TGATCAAGCC CGAGATGAAG ATGAAGTACT TCATGGACGG CAGCGTGAAC
              181 GGCCACGAGT TCACCGTGGA GGGCGAGGGC ACCGGCAAGC CCTACGAGGG CCACCAGGAG
              241 ATGACCCTGA GGGTGACAAT GGCCAAGGGC GGCCCCATGC CCTTCAGCTT CGACCTGGTG
              301 AGCCACACCT TCTGCTACGG CCACAGGCCC TTCACCAAGT ACCCCGAGGA GATCCCCGAC
              361 TACTTCAAGC AGGCCTTCCC CGAGGGCCTG AGCTGGGAGA GGAGCCTCCA GTTCGAGGAC
              421 GGCGGCTTCG CCGCCGTGAG CGCCCACATC AGCCTGAGGG GCAACTGCTT CGAGCACAAG
              481 AGCAAGTTCG TGGGCGTGAA CTTCCCCGCC GACGGCCCCG TGATGCAGAA CCAGAGCAGC
              541 GACTGGGAGC CCAGCACCGA GAAGATCACC ACCTGCGACG GCGTGCTGAA GGGCGACGTG
              601 ACCATGTACC TGAAGCTGGC CGGCGGCGGC AACCACAAGT GCCAGTTCAA GACCACCTAC
              661 AAGGCCGCCA AGAAGATCCT GAAGATGCCC CAGAGCCACT TCATCGGCCA CAGGCTGGTG
              721 AGGAAGACCG AGGGCAACAT CACCGAGCTG GTGGAGGACG CCGTGGCCCA CTGCTGACTG
              781 CAGGCTAGAG TTAACATCGA GGGATCAAGC TTATCGATAA TCAACCTCTG GATTACAAAA
              841 TTTGTGAAAG ATTGACTGGT ATTCTTAACT ATGTTGCTCC TTTTACGCTA TGTGGATACG
              901 CTGCTTTAAT GCCTTTGTAT CATGCTATTG CTTCCCGTAT GGCTTTCATT TTCTCCTTCC
              961 TTGTAATAAA TTCCTGGGTT GCTGTCTCTT TATGAGGAGT TGTGGCCCGG TTGTCAGGCA
             1021 ACGGTGGCCG TGGTGTGCAC TGTGTTTGCT GACGCAACCC CCACTGGTTT GGGGGCATTG
             1081 GCACACTGTC AGGCTCCCTT TCCGGACTTC GCTTTTCCCC CGTCCTAATT GTGGCCACCG
            1141 GGCCGAACCA TCCATTTCG
            //
            Primer: CMV_Forward (Pr0016)
            Region: CMV pro,5' LTR,HIV-1psi
            Sequence file: RDB14535_A7Ajd.seq check
            >08350_14535_A7Aj_1_CMV-Forward_B08_05_ABI24.ab1
                1 AGTCGCTCCG CCCATTGACG CAATGGGCGG TAGGCGTGTA CGGTGGGAGG TCTATATAAG
               61 CAGCGCGTTT TGCCTGTACT GGGTCTCTCT GGTTAGACCA GATCTGAGCC TGGGAGCTCT
              121 CTGGCTAACT AGGGAACCCA CTGCTTAAGC CTCAATAAAG CTTGCCTTGA GTGCTTCAAG
              181 TAGTGTGTGC CCGTCTGTTG TGTGACTCTG GTAACTAGAG ATCCCTCAGA CCCTTTTAGT
              241 CAGTGTGGAA AATCTCTAGC AGTGGCGCCC GAACAGGGAC TTGAAAGCGA AAGGGAAACC
              301 AGAGGAGCTC TCTCGACGCA GGACTCGGCT TGCTGAAGCG CGCACGGCAA GAGGCGAGGG
              361 GCGGCGACTG GTGAGTACGC CAAAAATTTT GACTAGCGGA GGCTAGAAGG AGAGAGATGG
              421 GTGCGAGAGC GTCAGTATTA AGCGGGGGAG AATTAGATCG CGATGGGAAA AAATTCGGTT
              481 AAGGCCAGGG GGAAAGAAAA AATATAAATT AAAACATATA GTATGGGCAA GCAGGGAGCT
              541 AGAACGATTC GCAGTTAATC CTGGCCTGTT AGAAACATCA GAAGGCTGTA GACAAATACT
              601 GGGACAGCTA CAACCATCCC TTCAGACAGG ATCAGAAGAA CTTAGATCAT TATATAATAC
              661 AGTAGCAACC CTCTATTGTG TGCATCAAAG GATAGAGATA AAAGACACCA AGGAAGCTTT
              721 AGACAAGATA GAGGAAGAGC AAAACAAAAG TAAGACCACC GCACAGCAAG CGGCCGCTGA
              781 TCTTCAGACC TGGAGGAGGA GATATGAGGG ACAATTGGGA GAAGTGAATT ATATAAATAT
              841 AAAGTAGTAA AAATTGAACC ATTAGGAGTA GCACCCACCA AAGGCAAAGA GAAGAGTGGT
              901 GCAGAGAGAA AAAAGAGCAG TTGGAATAGG AGCTTTTGTT CCTTGGGTTC TTGGGGAGCA
              961 GCAAGAGCAC TATGGGGCGC AGCGTTCATT GACGCTGACG GTACAGTAGA CATAATGTCT
             1021 GCTATAGTGC AGCAGCGACC ACTTGCCTGA CGCTATGAGG CCACAGCATC TGTGCCACCT
            1081 CACAAG
            //
            Primer: f1ori_R3 (Pr0142)
            Region: bGHpA,3' LTR
            Sequence file: RDB14535_A7Aje.seq check
            >08350_14535_A7Aj_1_f1ori_R3_E08_14_ABI24.ab1
                1 CGATGGACTG AGCCAGCTGG TTCTTTCCGC CTCAGAAGCC ATAGAGCCCA CCGCATCCCC
               61 AGCATGCCTG CTATTGTCTT CCCAATCCTC CCCCTTGCTG TCCTGCCCCA CCCCACCCCC
              121 CAGAATAGAA TGACACCTAC TCAGACAATG CGATGCAATT TCCTCATTTT ATTAGGAAAG
              181 GACAGTGGGA GTGGCACCTT CCAGGGTCAA GGAAGGCACG GGGGAGGGGC AAACAACAGA
              241 TGGCTGGCAA CTAGAAGGCA CAGTCGAGGC TGATCAGCGG GTTTAAACGG GCCCTGCTAG
              301 AGATTTTCCA CACTGACTAA AAGGGTCTGA GGGATCTCTA GTTACCAGAG TCACACAACA
              361 GACGGGCACA CACTACTTGA AGCACTCAAG GCAAGCTTTA TTGAGGCTTA AGCAGTGGGT
              421 TCCCTAGTTA GCCAGAGAGC TCCCAGGCTC AGATCTGGTC TAACCAGAGA GACCCAGTAC
              481 AGTCCGGATG CAGCTCTCGG GCCATGTGAT GAAATGCTAG GCGGCTGTCA AACCTCCACT
              541 CTAATACTTC TCTCTCCGGG TCATCCATCC CATGCAGGCT CACAGGGTGT AACAAGCGGG
              601 TGTTCTCTCC TTCATTGGCT TCTTCTACCT TCTCTTGCTC AACTGGTACT AGCTTGTAGC
              661 ACCATCCAAA GGTCAGTGGA TATCTGATCC CTGGCCCTGG TGTGTAGTTC TGCCAATCAG
              721 GGAAGTAGCC TTGTGTGTGG TAGATCCACA GATCAAGGAT ATCTTGTCTT CGTTGGGAGT
              781 GAATTAGCCC TTTCCAGTCC CCCCTTTTCT TTTAAAAAGT GGCTAAGATC TACAGCTGCC
              841 TTGTAAGTCA TTGGTCTTAA GGTACCTGAG TGTGACTGGA AAACCCACCT CTCTCCTCTG
              901 TGCTTCTAGC CAGGCACAAT CAGCATGGTA GCTGCTGTAT TGCTACTGTG ATGGCTCATG
              961 TTTTTTCTAG TCTCGACGGT ATCGAATGCC GGAGCCGCTA AACGGGAATT CCGAACTCGA
            1021 TCTGAAGACT AGTAGACCGA AGCTCAGCGT CACAGTCCGG AGGAAGTC
            //
            Primer: SV40pro_F (Pr0110)
            Region: SV40 pro_ori,Zeo,SV40pA
            Sequence file: RDB14535_A7Ajf.seq check
            >08350_14535_A7Aj_1_SV40pro_F_H08_23_ABI24.ab1
                1 CCTGTCCTTG CATTCAGAGT AGTGAGGAGG CTTTTTTGGA GGCCTAGGCT TTTGCAAAAA
               61 GCTCCCGGGA GCTTGTATAT CCATTTTCGG ATCTGATCAG CACGTGTTGA CAATTAATCA
              121 TCGGCATAGT ATATCGGCAT AGTATAATAC GACAAGGTGA GGAACTAAAC CATGGCCAAG
              181 TTGACCAGTG CCGTTCCGGT GCTCACCGCG CGCGACGTCG CCGGAGCGGT CGAGTTCTGG
              241 ACCGACCGGC TCGGGTTCTC CCGGGACTTC GTGGAGGACG ACTTCGCCGG TGTGGTCCGG
              301 GACGACGTGA CCCTGTTCAT CAGCGCGGTC CAGGACCAGG TGGTGCCGGA CAACACCCTG
              361 GCCTGGGTGT GGGTGCGCGG CCTGGACGAG CTGTACGCCG AGTGGTCGGA GGTCGTGTCC
              421 ACGAACTTCC GGGACGCCTC CGGGCCGGCC ATGACCGAGA TCGGCGAGCA GCCGTGGGGG
              481 CGGGAGTTCG CCCTGCGCGA CCCGGCCGGC AACTGCGTGC ACTTCGTGGC CGAGGAGCAG
              541 GACTGACACG TGCTACGAGA TTTCGATTCC ACCGCCGCCT TCTATGAAAG GTTGGGCTTC
              601 GGAATCGTTT TCCGGGACGC CGGCTGGATG ATCCTCCAGC GCGGGGATCT CATGCTGGAG
              661 TTCTTCGCCC ACCCCAACTT GTTTATTGCA GCTTATAATG GTTACAAATA AAGCAATAGC
              721 ATCACAAATT TCACAAATAA AGCATTTTTT TTCACTGCAT TCTAGTTGTG GTTTGTCCAA
              781 ACTCATCAAT GTATCTTATC ATGTCTGTAT ACCGTCGACC TCTAGCTAGA GCTTGGCGTA
              841 ATCATGGTCA TAGCTGTTTC CTGTGTGAAA TTGTTATCCG CTCACAATTC CACACAACAT
              901 ACGAGCCGGA AGCATAAAGT GTAAAGCCCT GGGGGTGCCT AATGAGTGAG CTAACTCACA
              961 TTAAATTGCG TTTGCGCTCA CTGCCCGCTT TCCAGTCGGA AACCTGTCGT GCCAGCTGCA
             1021 TTAAATGAAA TCGGGCACGC GCGGGAGGAG GCGGGTTGCG TATGGGGCGC TCTTCGCTTC
             1081 CTCGATCCAC TTGAACTCGC TGCGCCTCGG ATCGGATTCC GGCCTTGCCG GGGAGAGCCG
            1141 GGT
            //

            Please visit Sequencing and PCR primers for primer information.


            References

            Original, user report and related articles

            reference Minagawa, A., Enhancing T Cell Receptor Stability in Rejuvenated iPSC-Derived T Cells Improves Their Use in Cancer Immunotherapy. Cell Stem Cell 23 (6): 850-858.e4 (2018). PMID 30449714.

            2023.11.16

            GNP_filter3_RDBDEP_html_231027.pl