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pCSII-CMV-MCS _n-GRAPHIC

Lentiviral expression vector of GRAPHIC probe (LZA).

Catalog number RDB15869
Resource name pCSII-CMV-MCS _n-GRAPHIC
Clone info. Lentiviral expression vector of GRAPHIC probe (GPI anchored Reconstitution-Activated Proteins Highlight Intercellular Connections), fluorescent indicator for intercellular contacts with optimized intercellular GFP reconstitution. This probe contains an mouse preproacrosin signal peptide (SP), superfolder GFP-NT, acidic leucine zipper domain (LZA), mouse Thy-1 GPI-anchored domain, see Fig. 1 of Kinoshita, N. et al., iScience 15: 28-38, 2019.
Comment Expression was confirmed by the depositor with detection of reconstituted GFP fluorescence.
Vector backbone CSII-CMV-MCS (plasmid)
Size of vector backbone 8.6 kb
Selectable markers Ampicillin (E. coli). Please note that Zeo resistance marker is not included in the lentivirus produced from this vector.
Gene/insert name mouse Acr cDNA mouse Thy1 cDNA Aequorea victoria GFP cDNA
Depositor|Developer Shimogori, Tomomi | Kinoshita, Nagatoki |
Other clones in our bank

External Database
mouse Acr mouse Thy1
    Aequorea victoria GFP

        Reference sequence
          
         
        Sequence (partial) RDB15869pka01.seq provided by the depositor

        Distribution information

        Please check terms and conditions set forth by the depositor, which are specified in the RIKEN BRC Catalog and/or Web Catalog.
        Terms and conditions for distribution In publishing the research results obtained by use of the BIOLOGICAL RESOURCE, a citation of literature designated by the DEPOSITOR (Kinoshita, N. et al., iScience 15: 28-38 (2019)) and an acknowledgment to the DEPOSITOR are requested. The use of the BIOLOGICAL RESOURCE is restricted to the academic researches conducted by non-profit organization.
        Additional terms and conditions:
        The RECIPIENT agrees to expressly describe the late Dr. Hiroyuki Miyoshi as the Developer of the lentivirus vector.
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        Please visit Information of Request for Distribution.[link] 
        Remarks Remember that you will be working with samples containing infectious virus.
        提供案内 (日本国内) [open/close]

        提供条件 利用者は、研究成果の公表にあたって寄託者の指定する文献 (Kinoshita, N. et al., iScience 15: 28-38 (2019)) を引用し、謝辞の表明を必要とする。本件リソースの使用は学術機関での学術研究に限る。
        付加的提供条件:
        レンチウイルスベクターについて、本件研究材料を利用した研究結果等を発表する際は、レンチウイルスベクターが故三好浩之博士により開発されたことを明示する。
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        提供依頼書 [Word]
        提供同意書 (MTA, 非営利機関による非営利学術研究用)[Word]
        手続きの概要は、「提供申込みについて[link]」をご覧ください。
        備考 このリソースはウイルス粒子産生用のため、取扱いに注意が必要です。

        Catalog # Resource name Shipping form Fee (non-profit org.)
        RDB15869 pCSII-CMV-MCS _n-GRAPHIC DNA solution

        Please review the QC test results indicated by check icon below as well as clone information before placing your order.

        How to cite this biological resource

        Materials & Methods section:

        The pCSII-CMV-MCS _n-GRAPHIC was provided by the RIKEN BRC through the National BioResource Project of the MEXT, Japan (cat. RDB15869).

        Reference section:

        Kinoshita, N., Huang, A.J.Y., McHugh, T.J., Suzuki, S.C., Masai, I., Kim, I.H., Soderling, S.H., Miyawaki, A., Shimogori, T., Genetically Encoded Fluorescent Indicator GRAPHIC Delineates Intercellular Connections. iScience 15: 28-38 (2019). PMID 31026667. [link to RRC of NBRP]

        Further references such as user reports and related articles (go to bottom)


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        QC test results

        RIKEN BRC has sequenced portions of this material for quality test.
        Please review the QC test results indicated by check icon as well as clone information before placing your order.

        Test sheet RDB15869_A8Cdp1-1.pdf check

        Nucleotide sequence of a portion of this resource (if available).

        Primer: EGFP-N_R2 (Pr0905)
        Region: insert 5', CMV pro_2
        Sequence file: RDB15869_A8Cda.seq check
        >D05101A1_A8Cd_1_EGFP-N_R2_C01_07_ABI24.ab1
            1 NNNNNNNNNN NNNNNNNNNN NNNNNNCNNN NNCNNNNNNC GCCNNANGTC NNGGNGGTCA
           61 CGNNGGTGGG CCAGGGCACG GGCAGCTTGC CGGTGGTGCA GATGAACTTC AGGGTCAGCT
          121 TGCCGATGGT GGCATCGCCC TCGCCCTCGC CGCGCACGCT GAACTTGTGG CCGTTTACGT
          181 CGCCGTCCAG CTCGACCAGG ATGGGCACCA CCCCGGTGAA CAGCTCCTCG CCCTTGCTCA
          241 CTCTAGCCTG CAGCGTGGTG TTATCCTTGG CAACCACGGA CACTGCCAAG ACCAGCACAG
          301 CGACAGTTGG CAGCATCTCT ACCATGGTGG CTCTAGCGGA TCTGACGGTT CACTAAACCA
          361 GCTCTGCTTA TATAGACCTC CCACCGTACA CGCCTACCGC CCATTTGCGT CAATGGGGCG
          421 GAGTTGTTAC GACATTTTGG AAAGTCCCGT TGATTTTGGT GCCAAAACAA ACTCCCATTG
          481 ACGTCAATGG GGTGGAGACT TGGAAATCCC CGTGAGTCAA ACCGCTATCC ACGCCCATTG
          541 ATGTACTGCC AAAACCGCAT CACCATGGTA ATAGCGATGA CTAATACGTA GATGTACTGC
          601 CAAGTAGGAA AGTCCCATAA GGTCATGTAC TGGGCATAAT GCCAGGCGGG CCATTTACCG
          661 TCATTGACGT CAATAGGGGG CGTANTTGGC ATATGATACA CTTGATGTAN TGCCAAGTGG
          721 GCAGTTTACC GTAAATACTC CACCCATTGA CGTCNATGGA AAGTCCCTAT TGNCGTTACT
          781 ATGGGAACAT ACGTCATTAT TGACGTCANT GGGCGGGGGT CGTTGGGCNG NCANNCNNGC
          841 NGGCCATTTA NCGTAAGTTA TGTNACGCNN ANNTNCATAT ATGGGCTATG ANNTNATGAN
        901 CCCGTNNTTG NNNNNNNNTN NNNNNNNNN
        //
        Primer: PRE_rev (Pr0250)
        Region: WPRE, insert 3'
        Sequence file: RDB15869_A8Cdb.seq check
        >D05101A1_1_A8Cd_PRE_rev_B01_04_ABI24.ab1
            1 NNNNNNNNNN NNNNNNNNNN NNNGNNCNNN NTAGTTAAGA NTACNNGTCA ATCTTTCNCA
           61 AATTTTGTAA TCCAGAGGTT GNTTATCGAT AAGCTTGATC CCTCGATGTT AACTCTAGAG
          121 GATCCGCGGC CGCTGCAGAA TTCTCGAGAC CGGTAGCGCT AGATTACAGA GAAATGAAGT
          181 CCAGGGCTTG GAGGAGGGAG AGGGAAAGCA GCAGCAGCAG CATCCAGGAT GTGTTCTGAA
          241 CCAGCAGGCT TATGCCGCCA TTCTCGAGTT GGTAGCTAGA CGATCCGCCA CCGCCAGAGC
          301 CACCTCCGCC TGAACCGCCT CCACCGCTAG ACGATCCGCC ACCGCCAGAG CCACCTCCGC
          361 CTGAACCGCC TCCACCGCTA GACGATCCGC CACCGCCAGA GCCACCTCCG CCTGAACCGC
          421 CTCCACCGCT AGCCTTCTGG GCCAGCTCCT TCTCCAGGGC CTGGAGCTCC CATTCGAGCT
          481 GGGCGTTCTC CTTCTCCAGG GCTTGCAGCT CCTTTTCGAG CTGGGCCATG GTGGCGCTAG
          541 CCGATCCGCC ACCGCCAGAG CCACCTCCGC CTGAACCGCC TCCACCGGAT CTCTGCTTGT
          601 CGGCGGTGAT ATAGACGTTG TGGCTGTTGA AGTTGTACTC CAGCTTGTGC CCCAGGATGT
          661 TGCCGTCCTC CTTGAAGTCG GTGCCCTTCA GCTCGATGCG GTTCACCAGG GTGTCGCCCT
          721 CNAACTTCAC AACGGCGCGG GTCTTGTATT TGCCGTCGTC CTTGANNGAN ANGGTGCGCT
          781 NCTGGANGTA NCCNTCNGGC ATGGNGGANT NNAAGAANTC NNGCTGCTTC ATGTGGNCNG
          841 GGGTANCGGN NGNNNNNCTG CNCNCNNNNN NNCNNGNNGG NCACNANGGN GGGNNNNGGG
        901 CACGNNNGCT NGNCNNNNNN NNNN
        //
        Primer: SV40pro_ori_F (Pr0731)
        Region: SV40 pro_ori, BleoR
        Sequence file: RDB15869_A8Cdc.seq check
        >D05101A1_A8Cd_1_SV40pro_ori_F_D01_10_ABI24.ab1
            1 NNNNNNNNNN NNCNNNNNNC GCCTCTGCCT CTGANCTATT CNNGAAGTAG TGAGGANGCT
           61 TTTTTGGAGG CCTAGGCTTT TGCAAAAAGC TCCCGGGAGC TTGTATATCC ATTTTCGGAT
          121 CTGATCAGCA CGTGTTGACA ATTAATCATC GGCATAGTAT ATCGGCATAG TATAATACGA
          181 CAAGGTGAGG AACTAAACCA TGGCCAAGTT GACCAGTGCC GTTCCGGTGC TCACCGCGCG
          241 CGACGTCGCC GGAGCGGTCG AGTTCTGGAC CGACCGGCTC GGGTTCTCCC GGGACTTCGT
          301 GGAGGACGAC TTCGCCGGTG TGGTCCGGGA CGACGTGACC CTGTTCATCA GCGCGGTCCA
          361 GGACCAGGTG GTGCCGGACA ACACCCTGGC CTGGGTGTGG GTGCGCGGCC TGGACGAGCT
          421 GTACGCCGAG TGGTCGGAGG TCGTGTCCAC GAACTTCCGG GACGCCTCCG GGCCGGCCAT
          481 GACCGAGATC GGCGAGCAGC CGTGGGGGCG GGAGTTCGCC CTGCGCGACC CGGCCGGCAA
          541 CTGCGTGCAC TTCGTGGCCG AGGAGCANGA CTGACACGTG CTACGAGATT TCGATTCCAC
          601 CGCCGCCTTC TATGAAAGGN TGGGCTTCGG AATCGTTTTC CGGGACGCCG GCTGGATGAT
          661 CCTCNNGCGC GGGGATCTCA TGCTGGAGTT CTTCGCCCNC CCCAACTTGN TTATTGCANC
          721 TTATAATGGT TACAAATAAA GCAATANCAT CACNAATTTC NCAAATAANN CNNTTTTTTT
          781 CNNTGCATTC TANTTGTGGT TTGNNCNAAA CTCNTCANTG TATCTTATCN TGTCTGNATA
          841 NCGTCNANCT CTANCTAGAN CTNGNNNNAN TCATGGNCNT AGCTGTTNNC NGNGNNAAAT
          901 NNNTANNCGC TCNNANTNCC NCNCNNCATA NNNNNCNNNA ANNNTNAANN NNNNNNNCCN
        961 NNNGNNGNCN NNNNGNNNNN NCNNNNNNNN NN
        //
        Primer: HIV-B_R (Pr0673)
        Region: HIV-1 psi, 5'LTR, CMV pro_1
        Sequence file: RDB15869_A8Cdd.seq check
        >D05101A1_A8Cd_1_HIV-B_R_A01_01_ABI24.ab1
            1 NNNNNNNNNN NNNNNNNNNN NNNNNNANNT TTTGNNNNNN NCNNNNNNCG CCGCCCCTCG
           61 CCTCTTGCCG TGCGCGCTNC NNCAAGCCGA GTCCTGCGTC GAGAGAGCTC CTCTGGTTTC
          121 CCTTTCGCTT TCAAGTCCCT GTTCGGGCGC CACTGCTAGA GATTTTCCAC ACTGACTAAA
          181 AGGGTCTGAG GGATCTCTAG TTACCAGAGT CACACAACAG ACGGGCACAC ACTACTTGAA
          241 GCACTCAAGG CAAGCTTTAT TGAGGCTTAA GCAGTGGGTT CCCTAGTTAG CCAGAGAGCT
          301 CCCAGGCTCA GATCTGGTCT AACCAGAGAG ACCCAGTACA GGCAAAACGC GCTGCTTATA
          361 TAGACCTCCC ACCGTACACG CCTACCGCCC ATTTGCGTCA ATGGGGCGGA GTTGTTACGA
          421 CATTTTGGAA AGTCCCGTTG ATTTTGGTGC CAAAACAAAC TCCCATTGAC GTCAATGGGG
          481 TGGAGACTTG GAAATCCCCG TGAGTCAAAC CGCTATCCAC GCCCATTGAT GTACTGCCAA
          541 AACCGCATCA CCATGGTAAT AGCGATGACT AATACGTAGA TGTACTGCCA AGTAGGAAAG
          601 TCCCATNAGG TCATGTACTG NNNNNNATGC CAGGCGGGCC ATTTACCGTC ATTGACGTCN
          661 ATAGGGGGCG TACTTGGCAT ATGATACACT TGANGTACTG NCNAGTGGGC AGNTTTANCG
          721 TAAATACTCC ACCCATTGAC GTCAATGGAA AAGNNCCTAT TGGCGTTACT ATGGGAACAT
          781 ANGTCNTTAT TGANNTCANT GGGNGGGGGT CGTTNGGCGG TCAGCCNGGC GGGNCNTTTA
          841 NCGTANNNNA TGTAACGNNG NNANNTCNNN ATNTGGGNCT ATGANNNNNN NGNNCCCCGT
          901 AATTNNATTN NNANTNANTN ANNNANNNNN ANNANNNNNN GNNCNANNNC GNANNNTCNN
        961 GGNCCCNNNA NANNCNNNNA ANNNNCNGNN NAANNGNNNN NNNNCCCNNN NNNNNNN
        //
        Primer: RRE-M_R (Pr0651)
        Region: RRE
        Sequence file: RDB15869_A8Cde.seq check
        >D05101A1_A8Cd_1_RRE-M_R_B01_04_ABI24.ab1
            1 NNNNNNNNNN NNNNNNNNNN NNNNNNNTGN GCCTCNNAGC CCTCAGCAAA TTGTTCTGCT
           61 GCTGCACTAT ACCAGNCAAT AATTGTCTGG CCTGTACCGT CAGCGTCATT GACGCTGCGC
          121 CCATAGTGCT TCCTGCTGCT CCCAAGAACC CAAGGAACAA AGCTCCTATT CCCACTGCTC
          181 TTTTTTCTCT CTGCACCACT CTTCTCTTTG CCTTGGTGGG TGCTACTCCT AATGGTTCAA
          241 TTTTTACTAC TTTATATTTA TATAATTCAC TTCTCCAATT GTCCCTCATA TCTCCTCCTC
          301 CAGGTCTGAA GATCAGCGGC CGGCCGCTTG CTGTGCGGTG GTCTTACTTT TGTTTTGCTC
          361 TTCCTCTATC TTGTCTAAAG CTTCCTTGGT GTCTTTTATC TCTATCCTTT GATGCACACA
          421 ATAGAGGGTT GCTACTGTAT TATATAATGA TCTAAGTTCT TCTGATCCTG TCTGAAGGGA
          481 TGGTTGTAGC TGTCCCAGTA TTTGTCTACA GCCTTCTGAT GTTTCTAACA GGCCAGGATT
          541 AACTGCGAAT CGTTCTAGCT CCCTGCTTGC CCATACTATA TGTTTTAATT TATATTTTTT
          601 CTTTCCCCCT GGCCTTAACC GAATTTTTTC CCATCNNNNN CTAATTCTCC CCCGCTTAAT
          661 ACTGACGCTC TCGCACCCAT CTCTCTCCTT CTAGCCTCCG CTAGTCAAAA TTTTTGGCGT
          721 ACTCACCAGN CGCCGCCCCT CGCCTCTTNN NGTGCGCGCT TCANCAAGCC NAGTCCTGCG
          781 TCNNGAGAGC TCCTCTGGNT NCCCTTTCGC TTNNAAGTNC CTGTTCNGGC GCCNCTGCTA
          841 NANANTTTCC ACACNGANNN AAANGGNCTG AGGGANCTCT AGTNANCNNN ANTCNCNNNN
          901 NANANGGGCN NNNNCNACNT GNANCANNCN ANGGNNNGCT TNANNGNGNN TTNNNNNGNG
        961 GGNNNNCNTA NNNNNCNNNN NNNNNN
        //
        Primer: RRE_F1 (Pr0796)
        Region: CPPT_CTS
        Sequence file: RDB15869_A8Cdf.seq check
        >D05101A1_A8Cd_1_RRE_F_B01_02_ABI08.ab1
            1 TTTGGGGTTG CTCTGGAAAA CTCATTTGCA CCACTGCTGT GCCTNGNNAT GCTAGTTGGA
           61 GTAATAAATC TCTGGAACAG ATTTGGAATC ACACGACCTG GATGGAGTGG GACAGAGAAA
          121 TTAACAATTA CACAAGCTTA ATACACTCCT TAATTGAAGA ATCGCAAAAC CAGCAAGAAA
          181 AGAATGAACA AGAATTATTG GAATTAGATA AATGGGCAAG TTTGTGGAAT TGGTTTAACA
          241 TAACAAATTG GCTGTGGTAT ATAAAATTAT TCATAATGAT AGTAGGAGGC TTGGTAGGTT
          301 TAAGAATAGT TTTTGCTGTA CTTTCTATAG TGAATAGAGT TAGGCAGGGA TATTCACCAT
          361 TATCGTTTCA GACCCACCTC CCAACCCCGA GGGGACCCGA CAGGCCCGAA GGAATAGAAG
          421 AAGAAGGTGG AGAGAGAGAC AGAGACAGAT CCATTCGATT AGTGAACGGA TCTACAAATG
          481 GCAGTATTCA TCCACAATTT TAAAAGAAAA GGGGGGATTG GGGGGTACAG TGCAGGGGAA
          541 AGAATAGTAG ACATAATAGC AACAGACNTA CAAACTAAAG AATTACAAAA ACNAANTTAC
          601 AAAAATTCAA AATTTTCGGG TTTATTACAG GGGACAGCAN AAANTTCACT TTGAATTAAT
          661 TCGATTAATA GTAATCAATT NNNGGGGTCA TTANTTCATA GCCCATATAT GGAGTTCCGC
          721 GTTACNNAAC TTACGGTAAA TGGCCCGCNT GGCTGANCGC CCAACGACCC CNNCCCATTG
          781 NNGTCNANNA NGACNNNNGT TNCNNNNGNN NCGNNNNNNN GGANTTTNCA NNNACGNNNN
        841 NGGGNGGNNN ANTNNNNGNA ANNNNCNNNN NNNNNN
        //
        Primer: BGH_rev2 (Pr0606)
        Region: 3' LTR
        Sequence file: RDB15869_A8Cdg.seq check
        >D05101A1_1_A8Cd_BGH_rev2_C01_07_ABI24.ab1
            1 NNNNNNNNNN NNNNNNNNNN NNGGNNGGGC NNNCAACAGN TGGCTGGCAA CTAGAAGGCA
           61 CAGTCGAGGC NNNNNNNNNN NNNNAAACGG GCCCTGCTAG AGATTTTCCA CACTNNCTAA
          121 AAGGGTCTGA GGGATCTCTA GTTACCAGAG TCACACAACA GACGGGCACA CACTACTTGA
          181 AGCACTCAAG GCAAGCTTTA TTGAGGCTTA AGCAGTGGGT TCCCTAGTTA GCCAGAGAGC
          241 TCCCAGGCTC AGATCTGGTC TAACCAGAGA GACCCAGTAC AGTCCGGATG CAGCTCTCGG
          301 GCCATGTGAT GAAATGCTAG GCGGCTGTCA AACCTCCACT CTAATACTTC TCTCTCCGGG
          361 TCATCCATCC CATGCAGGCT CACAGGGTGT AACAAGCGGG TGTTCTCTCC TTCATTGGCT
          421 TCTTCTACCT TCTCTTGCTC AACTGGTACT AGCTTGTAGC ACCATCCAAA GGTCAGTGGA
          481 TATCTGATCC CTGGCCCTGG TGTGTAGTTC TGCCAATCAG GGAAGTAGCC TTGTGTGTGG
          541 TAGATCCACA GATCAAGGAT ATCTTGTCTT CGTTGGGAGT GAATTAGCCC TTCCAGTCCC
          601 CCCTTTTCTT TTAAAAAGTG GCTAAGATCT ACAGCTGCCT TGTAAGTCAT TGGTCTTAAA
          661 GGTACCTGAN GTGTGACTGG AAAACCCACC TCCTCCTCCT CTTGTGCTTC TAGCCAGGCA
          721 CAATCAGCAT TGNTAGCTGC TGTATTGCTA CTTGTGATTG CTCCATGTTT TTCTAGGTCT
          781 CGACNGTATC GATGCGGGGN NGCGGCCNNA AGGGNNNTCC GANTNGNCTG ANGNCGAANN
          841 NNNAAGANNC NGNANANGCC GCNNANCNNN NANCNNNCCN CNGGNNNNNA NNNNNCNCNN
        901 NNNTNNNNNN CNNNNGNNNN TNNNANNNNN NNNTNNNNNN NNNN
        //

        Please visit Sequencing and PCR primers for primer information.


        References

        Original, user report and related articles

        original Kinoshita, N., Genetically Encoded Fluorescent Indicator GRAPHIC Delineates Intercellular Connections. iScience 15: 28-38 (2019). PMID 31026667. [link to RRC of NBRP]

        2024.03.26

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