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pCMV-ChRGR-Venus

Mammalian expression vector encoding a mammalian codon-optimized chopGR.

Catalog number RDB16776
Resource name pCMV-ChRGR-Venus
Clone info. Mammalian expression vector encoding a mammalian codon-optimized chopGR (channelopsin/green-receiver) tagged with Venus at the C-terminus under CMV promoter.
Comment Expression was confirmed by the depositor with whole-cell patch-clamp recording.
Vector backbone pVenus-N1 (plasmid)
Size of vector backbone 4.7 kb
Selectable markers Kan^r (E. coli), Neo^r (mammalian cells).
Gene/insert name Chlamydomonas reinhardtii acop1 (channelopsin-1) cDNA Chlamydomonas reinhardtii cop4 (acop2) cDNA
Reference of insert sequence LC415029 (DDBJ accession number)
Depositor|Developer Ishizuka, Toru |
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External Database
Chlamydomonas reinhardtii acop1 (channelopsin-1) Chlamydomonas reinhardtii cop4 (acop2)

        Reference sequence
          
         

        Distribution information

        Please check terms and conditions set forth by the depositor, which are specified in the RIKEN BRC Catalog and/or Web Catalog.
        Terms and conditions for distribution In publishing the research results obtained by use of the BIOLOGICAL RESOURCE, a citation of literature designated by the DEPOSITOR is requested. (Wen, L. et al., PLoS ONE 5 (9): e12893, 2010) For use of the BIOLOGICAL RESOURCE by a for-profit organization, the RECIPIENT must reach agreement on terms and conditions of use of it with DEPOSITOR and must obtain a prior written consent from the DEPOSITOR.
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        提供条件 利用者は、研究成果の公表にあたって寄託者の指定する文献を引用する(Wen, L. et al., PLoS ONE 5 (9): e12893, 2010)。営利機関の利用希望者は、事前に利用条件等につき寄託者と合意し、提供承諾を得ること。
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        RDB16776 pCMV-ChRGR-Venus DNA solution

        Please review the QC test results indicated by check icon below as well as clone information before placing your order.

        How to cite this biological resource

        Materials & Methods section:

        The pCMV-ChRGR-Venus was provided by the RIKEN BRC through the National BioResource Project of the MEXT, Japan (cat. RDB16776).

        Reference section:

        Wen, L., Wang, H., Tanimoto, S., Egawa, R., Matsuzaka, Y., Mushiake, H., Ishizuka, T., Yawo, H., Opto-current-clamp actuation of cortical neurons using a strategically designed channelrhodopsin. PLoS One 5 (9): e12893 (2010). PMID 20886118. [link to RRC of NBRP]

        Further references such as user reports and related articles (go to bottom)


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        Featured content Genetic Resources for Optgenetics Research (English text)

        QC test results

        RIKEN BRC has sequenced portions of this material for quality test.
        Please review the QC test results indicated by check icon as well as clone information before placing your order.

        Test sheet RDB16776_A8L5p1.pdf check

        Nucleotide sequence of a portion of this resource (if available).

        Primer: CMV_Forward ()
        Sequence file: RDB16776_A8L5a.seq check
        >D06115A8_A8L5_2_CMV_Forward_E01_13_ABI24.ab1
            1 CATCACTCCG CCCATTGACG CAATGGGCGG TAGGCGTGTA CGGTGGGAGG TCTATATAAG
           61 CAGAGCTGGT TTAGTGAACC GTCAGATCCG CTAGCGCTAC CGGACTCAGA TCTCGAGCTC
          121 AAGCTTCGAA TTCGCCACCA TGGCTCGGAG ACCTTGGCTG CTGGCACTGG CTCTGGCTGT
          181 CGCTCTGGCC GCTGGCTCTG CTGGGGCTTC TACTGGATCT GACGCAACAG TGCCCGTCGC
          241 TACTCAGGAC GGACCTGATT ACGTGTTCCA CAGGGCACAT GAGCGCATGC TGTTTCAGAC
          301 ATCTTATACT CTGGAAAACA ATGGCAGTGT CATCTGCATT CCCAACAATG GGCAGTGCTT
          361 CTGTCTGGCA TGGCTGAAGT CTAACGGCAC CAATGCCGAG AAACTGGCCG CTAACATCCT
          421 GCAGTGGATT ACATTCGCCC TGTCCGCTCT GTGCCTGATG TTTTACGGAT ATCAGACCTG
          481 GAAGTCTACA TGTGGCTGGG AGGAAATCTA CGTGGCTACC ATCGAGATGA TCAAGTTCAT
          541 CATTGAATAC TTCCACGAGT TTGACGAACC TGCCGTGATC TATAGCTCCA ACGGGAATAA
          601 GACTGTCTGG CTGAGATACG CTGAGTGGCT GCTGACCTGT CCAGTGATCC TGATTCATCT
          661 GAGCAACCTG ACTGGCCTGG CCAACGACTA TAATAAGAGA ACCATGGGGC TGCTGGTGAG
          721 TGATATCGGA ACAATTGTCT GGGGCACCAC AGCAGCCCTG TCAAAAGGCT ATGTGCGCGT
          781 CATCTTCTTT CTGATGGGCC TGTGCTACGG GATCTACACA TTCTTTAATG CTGCAAAGGT
          841 GTACATCGAG GCATATCACA CAGTCCCTAA AGGGCGGTGT AGACAGGTGG TCACTGGAAT
          901 GGCCTGGCTG TTCTTTGTGT CCTGGGGGAT GTTCCCAATC CTGTTTCTGC TGGGACCCGA
          961 AAGGATTCGG CCACATTAAC CAGTTTAATT CAGCCCATCG CTCATGCAAT TCTGGACCTG
         1021 GCCCAGCAAA AACTGCTGGG GGGGCTGCTT GGGACACTAC CCTGCGAGTG CTGATCACGA
        1081 AGCCATATCT TGAATTCATG ACGAATAATT CGGAAGAACT TAA
        //
        Primer: _Venus-N_R ()
        Sequence file: RDB16776_A8L5b.seq check
        >D06115A8_A8L5_2_Venus-N_R_F01_16_ABI24.ab1
            1 CTGTCCGGGA CGCTGACTTG TGGCCGTTTA CGTCGCCGTC CAGCTCGACC AGGATGGGCA
           61 CCACCCCGGT GAACAGCTCC TCGCCCTTGC TCACCATGGT GGCGACCGGT GGATCCTTCC
          121 CAGTCCCTTT GTTCACGGCT CCTGCCTCGG CTTCATCTTC CACCAGTGTT TCCACCTCAA
          181 TTTCGGTCCC GCCGATATTC AGTTTGGTAG TCTTCCGAAT ATCGCCATGA ATCAGGATAT
          241 GCTCGTGGAT CAGCACTCGC AGGTAGTGTC CCAGCAGCCC CCAGCAGTTT TTGCTGGCCA
          301 GGTCCAGAAT TGCATGAGCG ATGGCTGAAT TAAACTGGTT AATGTGGCCG AATCCTTCGG
          361 GTCCCAGCAG AAACAGGATT GGGAACATCC CCCAGGACAC AAAGAACAGC CAGGCCATTC
          421 CAGTGACCAC CTGTCTACAC CGCCCTTTAG GGACTGTGTG ATATGCCTCG ATGTACACCT
          481 TTGCAGCATT AAAGAATGTG TAGATCCCGT AGCACAGGCC CATCAGAAAG AAGATGACGC
          541 GCACATAGCC TTTTGACAGG GCTGCTGTGG TGCCCCAGAC AATTGTTCCG ATATCACTCA
          601 CCAGCAGCCC CATGGTTCTC TTATTATAGT CGTTGGCCAG GCCAGTCAGG TTGCTCAGAT
          661 GAATCAGGAT CACTGGACAG GTCAGCAGCC ACTCAGCGTA TCTCAGCCAG ACAGTCTTAT
          721 TCCCGTTGGA GCTATAGATC ACGGCAGGTT CGTCAAACTC GTGGAAGTAT TCAATGATGA
          781 ACTTGATCAT CTCGATGGTA GCCACGTAGA TTTCCTCCCA GCCACATGTA GACTTCCAGG
          841 TCTGATATCC GTAAAACATC AGGCACAGAG CGGACAGGGC GAATGTAATC CACTGCAGGA
          901 TGTTAGCGGC CAGTTTCTCG GCATTGGTGC CGTTAGACTT CAGCCATGCC AGACAGAAGC
          961 ACTGCCCATT GTTGGGAAAT GCAGATGACA CTGCCATTGT TTTCCAGAGT ATAAGATGTC
         1021 TGAAACAGCA TGCGCTCATG TGCCCTTGTT GGAACACGGT AAATCATGTT CCGATCTGAG
        1081 TTAGCGGAAC GGGTAACTGA TTGCGTCAGG AATTCCAGT
        //
        Primer: SV40polyA-R ()
        Sequence file: RDB16776_A8L5c.seq check
        >D06115A8_A8L5_2_SV40polyA-R_G01_19_ABI24.ab1
            1 AAAAATGGGA GTTTTAGCAG TAAACCTCTA CAAATGTGGT ATGGCTGATT ATGATCTAGA
           61 GTCGCGGCCG CTTACTTGTA CAGCTCGTCC ATGCCGAGAG TGATCCCGGC GGCGGTCACG
          121 AACTCCAGCA GGACCATGTG ATCGCGCTTC TCGTTGGGGT CTTTGCTCAG GGCGGACTGG
          181 TAGCTCAGGT AGTGGTTGTC GGGCAGCAGC ACGGGGCCGT CGCCGATGGG GGTGTTCTGC
          241 TGGTAGTGGT CGGCGAGCTG CACGCCGCCG TCCTCGATGT TGTGGCGGAT CTTGAAGTTG
          301 GCCTTGATGC CGTTCTTCTG CTTGTCGGCG GTGATATAGA CGTTGTGGCT GTTGTAGTTG
          361 TACTCCAGCT TGTGCCCCAG GATGTTGCCG TCCTCCTTGA AGTCGATGCC CTTCAGCTCG
          421 ATGCGGTTCA CCAGGGTGTC GCCCTCGAAC TTCACCTCGG CGCGGGTCTT GTAGTTGCCG
          481 TCGTCCTTGA AGAAGATGGT GCGCTCCTGG ACGTAGCCTT CGGGCATGGC GGACTTGAAG
          541 AAGTCGTGCT GCTTCATGTG GTCGGGGTAG CGGGCGAAGC ACTGCAGGCC GTAGCCCAGG
          601 GTGGTCACGA GGGTGGGCCA GGGCACGGGC AGCTTGCCCG GTGGTGCAGA TCAGCTTCAG
          661 GGTCAGCTTG CCGTAGTGGC ATCGCCCTCG CCCTCGCCCG GACACGCTGA ACTTGTGGCC
          721 GTTTACGTCG CCGTCCAGCT CGACCAGGAT GGGCACCACC CCGGTGAACA GCTCCTCGCC
          781 CTTGCTCACC ATGGTGGCGA CCGGTGGATC CTTTCCAGTT CCTTTGTTCC ACGCTTCTTG
          841 CCTCGCTTTC ATCTTTCCAC CAGTGTTTCC ACCCTCAATT TCGGTCCCGC CGAATATTCA
          901 GTTTGTTAGG TCTTCGAATT ATCGCATGAA TCAGGAATAT GTCTTCGGTG GAATACAAGC
          961 ACCTCGCAGT TATTGTCAGC AGCTCTCAGC AGTTTGCTTG CAAGTCGGAA TTGACTGACC
        1021 AATGCCTGAT ACCTGGTTAA TTGGCCGAAT CTCCGGTCCC AGCCGA
        //
        Primer: SV40pro_F
        Sequence file: RDB16776_A8L5a.seqd.seq check
        1

        Please visit Sequencing and PCR primers for primer information.


        References

        Original, user report and related articles

        original Wen, L., Opto-current-clamp actuation of cortical neurons using a strategically designed channelrhodopsin. PLoS One 5 (9): e12893 (2010). PMID 20886118. [link to RRC of NBRP]
        protocol Asano, T., Myogenic Maturation by Optical-Training in Cultured Skeletal Muscle Cells. Methods Mol. Biol. 1668: 135-145 (2017). PMID 28842907.

        2023.11.23

        GNP_filter3_RDBDEP_html_231027.pl