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pBS2SK+IA-ORF2

Plasmid vector of SARS-CoV2 cDNA encoding ORF2 (Spike protein).

Catalog number RDB19551
Resource name pBS2SK+IA-ORF2
Clone info. Plasmid vector of SARS-CoV2 cDNA encoding ORF2 (Spike protein). The cDNA was amplified from the genomic RNA of hCoV-19/Japan/NGS-IA-1/2020 (GISAID accession no. EPI-ISL-481251) by RT-PCR and cloned into the SalI site of pBluescript SK(+). Possible RNA synthesis using T7 and T3 RNA polymerase.
Comment It can be liberated by SalI and SmaI or XbaI double digestion
Vector backbone pBluescript II SK (+) (plasmid)
Size of vector backbone 3.0 kb
Selectable markers Ampicillin
Gene/insert name SARS-CoV-2 ORF2 cDNA
Depositor|Developer DNA Bank, | Nakade, Koji |
Other clones in our bank

External Database
SARS-CoV-2 ORF2

          Reference sequence
            OL778958.1
           
          Sequence (full) RDB19551zzk01.seq provided by the depositor

          Distribution information

          Please check terms and conditions set forth by the depositor, which are specified in the RIKEN BRC Catalog and/or Web Catalog.
          Terms and conditions for distribution The RECIPIENT agrees to expressly describe the acknowledgement of the NBRP Human Pathogenic Viruses as the source of the BIOLOGICAL RESOURCE in any publication. RECIPIENT which wants to use the BIOLOGICAL RESOURCE for the purpose other than education or not-for-profit research is requested to obtain approval from the Institute of Tropical Medicine, Nagasaki University.
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          提供条件 本件リソースを使用して研究成果を発表する場合、NBRPヒト病原ウイルスから提供されたことを明記する。本件リソースを非営利機関が非営利目的の教育・研究用に用いる場合以外は、長崎大学熱帯医学研究所の許諾を必要とする。
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          RDB19551 pBS2SK+IA-ORF2 DNA solution

          Please review the QC test results indicated by check icon below as well as clone information before placing your order.

          How to cite this biological resource

          Materials & Methods section:

          The pBS2SK+IA-ORF2 was provided by the RIKEN BRC through the National BioResource Project of the MEXT, Japan (cat. RDB19551).

          Reference section:

          Further references such as user reports and related articles (go to bottom)


          References and tips

          Featured content


          QC test results

          RIKEN BRC has sequenced portions of this material for quality test.
          Please review the QC test results indicated by check icon as well as clone information before placing your order.

          Test sheet RDB19551_B2C7p1-1.pdf check

          Nucleotide sequence of a portion of this resource (if available).

          Primer: pUC-M13_-100 (Pr0310)
          Region: T7 pro,insert CDS: 1nt-335nt
          Sequence file: RDB19551_B2C7a.seq check
          >19551_B2C7F_2_pUC-M13_-100_A01_01_ABI08.ab1
              1 NNNNNNNNNN NNNNNNNNNN NNNNNNNNAN NGCCNGGGTT TTCCCNGTCA CGACGTTGTA
             61 AAACGACGGC CAGTGAGCGC GCGTAATACG ACTCACTATA GGGCGAATTG GGTACCGGGC
            121 CCCCCCTCGA GGTCGACAAA CGAACAATGT TTGTTTTTCT TGTTTTATTG CCACTAGTCT
            181 CTAGTCAGTG TGTTAATCTT ACAACCAGAA CTCAATTACC CCCTGCATAC ACTAATTCTT
            241 TCACACGTGG TGTTTATTAC CCTGACAAAG TTTTCAGATC CTCAGTTTTA CATTCAACTC
            301 AGGACTTGTT CTTACCTTTC TTTTCCAATG TTACTTGGTT CCATGCTATA CATGTCTCTG
            361 GGACCAATGG TACTAAGAGG TTTGATAACC CTGTCCTACC ATTTAATGAT GGTGTTTATT
            421 TTGCTTCCAC TGAGAAGTCT AACATAATAA GAGGCTGGAT TTTTGGTACT ACTTTAGATT
            481 CNAAGACCCA GTCCCTACTT ATTGTTAATA ACGCTACTAA TGTTGTTATT AAAGTCTGTG
            541 AATTTCAATT TTGTAATGAT CCATTTTTGG GTGTTTATTA CCACAAAAAC AACAAAAGTT
            601 GGATGGAAAG TGAGTTCAGA GTTTATTCTA GTGCGAATAA TTGCACTTTT GAATATGTCT
            661 CTCAGCCTTT TCTTATGGAC CTTGAAGGAA AACAGGGTAA TTTCAAAAAT CTTAGGGAAT
            721 TTGTGTTTAA NAATATTGAT GGNTATTTTA AAATATATTC TAAGCACACG CCTATTAATT
            781 TAGTGCGTGA TCTCCCTCNN NGTTTTTCGG CTTTAGAACC ATTGGTAGAN TTGCCAATAN
            841 GTATTAACNT CACTANGTTT CNAACTTTAC TTGCTTTNCA TANAAGTTAN TTGACTCCTG
            901 GTGANTCTTC NTCNNNTGGA NNGCTGGNGN TGCANCTTAN TATGTGGGNT ANCTTCNACC
            961 NNNNNTTTTC TNTTAAAATA NAATGNAANT GGNNNCNTTN NNNANGCTGN ANACTGNGNN
          1021 NTNGANCNNN NNNNNNAANN NAANNNNNNN NNN
          //
          Primer: pUC-CAPbs_up_f2 (Pr0739)
          Region: lac pro,lac O,T3 pro,insert CDS: 3822nt-3310nt
          Sequence file: RDB19551_B2C7b.seq check
          >19551_B2C7F_2_pUC-CAPbs_up_F2_F02_06_ABI08.ab1
              1 NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNCTTTATG CTTCCGGCTC GTATGTTGTG
             61 TGGAATTGTG AGCGGATAAC AATTTCACAC AGGAAACAGC TATGACCATG ATTACGCCAA
            121 GCGCGCAATT AACCCTCACT AAAGGGAACA AAAGCTGGAG CTCCACCGCG GTGGCGGCCG
            181 CTCTAGAACT AGTGGATCCC CCGGGCTGCA GGAATTCGAT ATCAAGCTTA TCGATACCTT
            241 ATGTGTAATG TAATTTGACT CCTTTGAGCA CTGGCTCAGA GTCGTCTTCA TCAAATTTGC
            301 AGCAGGATCC ACAAGAACAA CAGCCCTTGA GACAACTACA GCAACTGGTC ATACAGCAAA
            361 GCATAATTGT CACCATTACT ATGGCAATCA AGCCAGCTAT AAAACCTAGC CAAATGTACC
            421 ATGGCCATTT TATATACTGC TCATACTTTC CAAGTTCTTG GAGATCGATG AGAGATTCAT
            481 TTAAATTCTT GGCAACCTCA TTGAGGCGGT CAATTTCTTT TTGAATGTTT ACAACTGAAG
            541 CATTAATGCC AGAGATGTCA CCTAAATCAA CATCTGGTGA TGTATGATTC TTAAAATATT
            601 TATCTAACTC CTCCTTGAAT GAGTCTAATT CAGGTTGCAA AGGATCATAA ACTGTGTTGT
            661 TGACAATTCC TATTACAACA TCACAGTTAC CAGACACAAA TGTGTTGTCT GTAGTAATGA
            721 TTTGTGGTTC ATAAAAATTC CTTTGTGTTA CNAACCAGTG TGTGCCATTT GAAACANAGA
            781 CNCCTTCACG ANGAAAGTGT GCTTTTCCAT CATGACAAAT GGCANGANCA GTTGTGAAGT
            841 TCTTTTCTTG TGCAGGGANN TAANTCACAT GCNANAANAN TACNCCATGA NGNGCTGANT
            901 GANGGANNNA NNTNNNNNGA NANCCCTTTN CNCAAAANTC NNCTCTTTTT NANNGNCCNA
            961 GNACNCNCTC TGANNNTTTA NNANCANNNA NANNANCNNA ANNTCNNANT NCNGCANNNN
          1021 TNNNNNNNNN N
          //
          Primer: SARS-CoV-2_22450R (Pr1168)
          Region: insert CDS: 826nt-91nt
          Sequence file: RDB19551_B2C7c.seq check
          >19551_B2C7F_2_SARS-CoV-2_22450R_D01_04_ABI08.ab1
              1 NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN TTTNNTTATA TTTTAATAGG AAAAGTCCTA
             61 GGTTGAAGAT AACCCACATA ATAAGCTGCA GCACCAGCTG TCCAACCTGA AGAAGAATCA
            121 CCAGGAGTCA AATAACTTCT ATGTAAAGCA AGTAAAGTTT GAAACCTAGT GATGTTAATA
            181 CCTATTGGCA AATCTACCAA TGGTTCTAAA GCCGAAAAAC CCTGAGGGAG ATCACGCACT
            241 AAATTAATAG GCGTGTGCTT AGAATATATT TTAAAATAAC CATCAATATT CTTAAACACA
            301 AATTCCCTAA GATTTTTGAA ATTACCCTGT TTTCCTTCAA GGTCCATAAG AAAAGGCTGA
            361 GAGACATATT CAAAAGTGCA ATTATTCGCA CTAGAATAAA CTCTGAACTC ACTTTCCATC
            421 CAACTTTTGT TGTTTTTGTG GTAATAAACA CCCAAAAATG GATCATTACA AAATTGAAAT
            481 TCACAGACTT TAATAACAAC ATTAGTAGCG TTATTAACAA TAAGTAGGGA CTGGGTCTTC
            541 GAATCTAAAG TAGTACCAAA AATCCAGCCT CTTATTATGT TAGACTTCTC AGTGGAAGCA
            601 AAATAAACAC CATCATTAAA TGGTAGGACA GGGTTATCAA ACCTCTTAGT ACCATTGGTC
            661 CCAGAGACAT GTATAGCATG GAACCAAGTA ACATTGGAAA AGAAAGGTAA GAACAAGTCC
            721 TGAGTTGAAT GTAAAACTGA GGATCTGAAA ACTTTGTCAG GGTAATAAAC ACCACGTGTG
            781 AAAGANNTAG TGTATGCAGG GGGTAATTGA GTTCTGGNTG TAAGATTAAC ACACTGANTA
            841 GAGANTAGTG GCAATAAAAC AAGAAAAANA AACATTGTTC GNTTNNCGAN NNCGAGGGGG
            901 GGNCNGGNAC CCANTTCGNC CNATAGTGAG NNNNATTACG CGCGCNNNCN GGNCGNCGTT
            961 TTNNANNGTC NNGACNGGNA AANNCCNNNN GTNANCCNAN NTNANNCGCC TNGNANNANA
           1021 TCCCCNNTTC GNCNNCTNGN GNNANANCNA ANANNNCCGC NNNNNNNGNC NNNNCCNNCN
          1081 NNNNNNNANN NNNNNNGNNN NNNGGNNNNN NNCNNNNNNN NNN
          //
          Primer: SARS-CoV-2_22192F (Pr1153)
          Region: insert CDS: 691nt-1189nt
          Sequence file: RDB19551_B2C7d.seq check
          >19551_B2C7F_2_SARS-CoV-2_22192F_C01_03_ABI08.ab1
              1 NNNNNNNNNN NNNNNNNNNN NNNNNNNNNT TNNNNNNNNN TGGTAGANTT GCCNATAGGT
             61 ATTAACATCA CTAGGTTTCA AACTTTACTT GCTTTACATA GAAGTTATTT GACTCCTGGT
            121 GATTCTTCTT CAGGTTGGAC AGCTGGTGCT GCAGCTTATT ATGTGGGTTA TCTTCAACCT
            181 AGGACTTTTC TATTAAAATA TAATGAAAAT GGAACCATTA CAGATGCTGT AGACTGTGCA
            241 CTTGACCCTC TCTCAGAAAC AAAGTGTACG TTGAAATCCT TCACTGTAGA AAAAGGAATC
            301 TATCAAACTT CTAACTTTAG AGTCCAACCA ACAGAATCTA TTGTTAGATT TCCTAATATT
            361 ACAAACTTGT GCCCTTTTGG TGAAGTTTTT AACGCCACCA GATTTGCATC TGTTTATGCT
            421 TGGAACAGGA AGAGAATCAG CAACTGTGTT GCTGATTATT CTGTCCTATA TAATTCCGCA
            481 TCATTTTCCA CTTTTAAGTG TTATGGAGTG TCTCCTACTA AATTAAATGA TCTCTGCTTT
            541 ACTAATGTCT ATGNNNANTC ATTTGTAATT AGAGGTGATG AAGTCAGACA AATCGCTCCA
            601 GGGCAAACTG GAAAGATTGC TGATTATAAT TATAAATTAC CAGATGATTT TACAGGCTGC
            661 GTTATAGCTT GGAATTCTAA CAATCTTGAT TCTAAGGTTG GTGGTAATTA TAATTACCTG
            721 TATAGATTGT TTAGGAAGTC TAATCTCAAA CCTTTNGANA GAGATATTTC NANCTGAAAT
            781 CTATCAGGCC GGTAGCACNC CTTGTAATGG TGTTGAANGT NNNNNNTGTT ACTTTCCTTT
            841 ANNATCATAT GGNTTCCANC NACTAATGGT GTTGGTTACN ANCNNNNANN GANTANTANT
            901 ACTTTCNTTT TGNACTTCTA CATGCNCCAG CNACTGTTTG TGGNANCTAA AANGTCTACT
            961 NANTTTNNNT AAAAACNAAN GNGNCNATTN NNNNNNNCNN NNGNTNNACN NNNCAGGNNT
           1021 NNTNNCTGAN NNNNNANNAA AANNTTCNGN NNTTNCNNNN ANTTNGNNNN ANNNNNTNNN
          1081 NNNNNNN
          //
          Primer: SARS-CoV-2_23.2R (Pr1167)
          Region: insert CDS: 1598nt-913nt
          Sequence file: RDB19551_B2C7e.seq check
          >19551_B2C7F_2_SARS-CoV-2_23.2R_F01_06_ABI08.ab1
              1 NNNNNNNNNN NNNNNNNNNN NNNNNNNGNN NCNTTTGTTT TNNANNNNAA ATTAGTAGAC
             61 TTTTTAGGTC CACAAACAGT TGCTGGTGCA TGTAGAAGTT CAAAAGAAAG TACTACTACT
            121 CTGTATGGTT GGTAACCAAC ACCATTAGTG GGTTGGAAAC CATATGATTG TAAAGGAAAG
            181 TAACAATTAA AACCTTCAAC ACCATTACAA GGTGTGCTAC CGGCCTGATA GATTTCAGTT
            241 GAAATATCTC TCTCAAAAGG TTTGAGATTA GACTTCCTAA ACAATCTATA CAGGTAATTA
            301 TAATTACCAC CAACCTTAGA ATCAAGATTG TTAGAATTCC AAGCTATAAC GCAGCCTGTA
            361 AAATCATCTG GTAATTTATA ATTATAATCA GCAATCTTTC CAGTTTGCCC TGGAGCGATT
            421 TGTCTGACTT CATCACCTCT AATTACAAAT GAATCTGCAT AGACATTAGT AAAGCAGAGA
            481 TCATTTAATT TAGTAGGAGA CACTCCATAA CACTTAAAAG TGGAAAATGA TGCGGAATTA
            541 TATAGGACAG AATAATCAGC AACACAGTTG CTGATTCTCT TCCTGTTCCA AGCATAAACA
            601 GATGCAAATC TGGTGGCGTT AAAAACTTCA CCAAAAGGGC ACAAGTTTGT AATATTAGGA
            661 AATCTAACAA TAGATTCTGT TGGTTGGACT CTAAAGTTAG AAGTTTGATA GATTCCTTTT
            721 TCTACAGTGA AGGANTTCAA CGTACACTTT GTTTCTGAGA GAGGGTCAAG TGCACAGTCN
            781 ANNNNNNCTG TANNGNNTCC ATTTTCATTA TATTTTAATA NAAAAGTCCT AGGTTGAANA
            841 NAACCNNCAT AATAAGCTGC AGCACCAGCT GTCCNNCCTG NANNANNAAT CNCCAGGAGN
            901 CNAATAANTT CTATGTAAAN CNAGTAAAGN TTGAAACCTA NNGATGNNNA TACCTATTGN
            961 NAANNCTACC ANNGGTTCTA AAGCCNAAAA NCCTGANGGA NANCACGCNN NANNNANTAG
           1021 GNGNGNGNNT ANANNNNNNN TAAAATANNC NTNNATNNTC TTAAANNNNN NNNNCNNNNN
          1081 NTTTTNAANT TNNCCNNNTT NNNNTNNNNN NNNNN
          //
          Primer: SARS-CoV-2_23562R (Pr1166)
          Region: insert CDS: 1956nt-1240nt
          Sequence file: RDB19551_B2C7f.seq check
          >19551_B2C7F_2_SARS-CoV-2_23562R_H01_08_ABI08.ab1
              1 NNNNNNNNNN NNNNNNNNNN NNNNNNNNCT NNNNTGAGTT GTTGANNTGN NNNNNCCCTA
             61 TTAAACAGCC TGCACGTGTT TGAAAAACAT TAGAACCTGT AGAATAAACA CGCCAAGTAG
            121 GAGTAAGTTG ATCTGCATGA ATAGCAACAG GGACTTCTGT GCAGTTAACA TCCTGATAAA
            181 GAACAGCAAC CTGGTTAGAA GTATTTGTTC CTGGTGTTAT AACACTGACA CCACCAAAAG
            241 AACATGGTGT AATGTCAAGA ATCTCAAGTG TCTGTGGATC ACGGACAGCA TCAGTAGTGT
            301 CAGCAATGTC TCTGCCAAAT TGTTGGAAAG GCAGAAACTT TTTGTTAGAC TCAGTAAGAA
            361 CACCTGTGCC TGTTAAACCA TTGAAGTTGA AATTGACACA TTTGTTTTTA ACCAAATTAG
            421 TAGACTTTTT AGGTCCACAA ACAGTTGCTG GTGCATGTAG AAGTTCAAAA GAAAGTACTA
            481 CTACTCTGTA TGGTTGGTAA CCAACACCAT TAGTGGGTTG GAAACCATAT GATTGTAAAG
            541 GAAAGTAACA ATTAAAACCT TCAACACCAT TACAAGGTGT GCTACCGGCC TGATAGATTT
            601 CAGTTGAAAT ATCTCTCTCA AAAGGTTTGA GATTAGACTT CCTAAACAAT CTATACAGGT
            661 AATTATAATT ACCACCAACC TTAGAATCAA GATTGTTAGA ATTCCAAGCT ATAACGCAGC
            721 CTGTAAAATC ATCTGGTAAT TTATAATTAT AATCAGCAAT CTTTCCAGTT TGNCCTGNAG
            781 CGATTTGTCT GACTTCNTCA CCTCTAATTA CAAATGAATC TGCATAGACA TTAGTAAAGC
            841 AGAGATCATT TAATTTAGTA NGAGACACTC CNTAACACTT AAAAGTGGAA ANNGATGCGG
            901 AATTATATAG GANAGAATAN TCANCNACAC AGTTGCTGAN TCTCNNNCTG NNNNNAGCAT
            961 NAACNGANGN AANTCTGGTG NNGNTAAAAN CNTCNNCNAA ANGGNNNAAG TTTNNNNNAN
           1021 TNNNAAATCN ANCNNNANNN TNNGNTNGNT NNGNNNNNNA NNNNNNAANT NGNNANANTN
          1081 CNTTTTTCNN NNNNNNNN
          //
          Primer: SARS-CoV-2_24240R (Pr1169)
          Region: insert CDS: 2600nt-1827nt
          Sequence file: RDB19551_B2C7g.seq check
          >19551_B2C7F_2_SARS-CoV-2_24240R_B02_02_ABI08.ab1
              1 NNNNNNNNNN NNNNNNNNNN NNGNNNNNNG TGCNNAAGTG TATTGAGCAA TCATTTCNTC
             61 TGTGAGCAAA GGTGGCAAAA CAGTAAGGCC GTTAAACTTT TGTGCACAAA TGAGGTCTCT
            121 AGCAGCAATA TCACCAAGGC AATCACCATA TTGTTTGATG AAGCCAGCAT CTGCAAGTGT
            181 CACTTTGTTG AAAAGTAGAT CTTCAATAAA TGACCTCTTG CTTGGTTTTG ATGGATCTGG
            241 TAATATTTGT GAAAAATTAA AACCACCAAA ATCTTTAATT GGTGGTGTTT TGTAAATTTG
            301 TTTGACTTGT GCAAAAACTT CTTGGGTGTT TTTGTCTTGT TCAACAGCTA TTCCAGTTAA
            361 AGCACGGTTT AATTGTGTAC AAAAACTGCC ATATTGCAAC AAAAGATTGC TGCATTCAGT
            421 TGAATCACCA CAAATGTACA TTGTACAATC TACTGATGTC TTGGTCATAG ACACTGGTAG
            481 AATTTCTGTG GTAACACTAA TAGTAAAATT TGTGGGTATG GCAATAGAGT TATTAGAGTA
            541 AGCAACTGAA TTTTCTGCAC CAAGTGACAT AGTGTAGGCA ATGATGGATT GACTAGCTAC
            601 ACTACGTGCC CGCCGAGGAG AATTAGTCTG AGTCTGATAA CTAGCGCATA TACCTGCACC
            661 AATGGGTATG TCACACTCAT ATGAGTTGTT GACATGTTCA GCCCCTATTA AACAGCCTGC
            721 ACGTGTTTGA AAAACATTAG AACCTGTAGA ATAAACACGC CAAGTAGGAG TAAGTTGATC
            781 TGCATGAATA GCAACAGGGA CTTCTGTGCA GTTAACATCC TGATAAAGAA CANCAACCTG
            841 NTTAGAAGTA TTTGTTCCTG NTGTTATAAC NCTGACACCA CNNAAAGAAN NTGGNGTAAT
            901 GTCAAGAATC TCAAGTGTCT GNGNATNANG GANAGCATNA NTANTGTCAN CANTGNCTCT
          961 GNNAANNGNN NGNAANNNNN NNNNTTTTTG NTNNNNTCNN NNNNNNNN
          //
          Primer: SARS-CoV-2_24001F (Pr1156)
          Region: insert CDS: 2501nt-3225nt
          Sequence file: RDB19551_B2C7h.seq check
          >19551_B2C7F_2_SARS-CoV-2_24001F_A02_01_ABI08.ab1
              1 NNNNNNNNNN NNNNNNNNNT NNNNNNAAGT GNNNCTTGCA GATGCTGGCT TCNTCAAACA
             61 ATATGGTGAT TGCCTTGGTG ATATTGCTGC TAGAGACCTC ATTTGTGCAC AAAAGTTTAA
            121 CGGCCTTACT GTTTTGCCAC CTTTGCTCAC AGATGAAATG ATTGCTCAAT ACACTTCTGC
            181 ACTGTTAGCG GGTACAATCA CTTCTGGTTG GACCTTTGGT GCAGGTGCTG CATTACAAAT
            241 ACCATTTGCT ATGCAAATGG CTTATAGGTT TAATGGTATT GGAGTTACAC AGAATGTTCT
            301 CTATGAGAAC CAAAAATTGA TTGCCAACCA ATTTAATAGT GCTATTGGCA AAATTCAAGA
            361 CTCACTTTCT TCCACAGCAA GTGCACTTGG AAAACTTCAA GATGTGGTCA ACCAAAATGC
            421 ACAAGCTTTA AACACGCTTG TTAAACAACT TAGCTCCAAT TTTGGTGCAA TTTCAAGTGT
            481 TTTAAATGAT ATCCTTTCAC GTCTTGACAA AGTTGAGGCT GAAGTGCAAA TTGATAGGTT
            541 GATCACAGGC AGACTTCAAA GTTTGCAGAC ATATGTGACT CAACAATTAA TTAGAGCTGC
            601 AGAAATCAGA GCTTCTGCTA ATCTTGCTGC TACTAAAATG TCAGAGTGTG TACTTGGACA
            661 ATCAAAAAGA GTTGATTTTT GTGGAAAGGG CTATCATCTT ATGTCCTTCC CTCAGTCAGC
            721 ACCTCATGGT GTAGTCTTCT TGCATGTGAC TTATGTCCCT GCACAAGAAA AGAACTTCNC
            781 AACTGCTCCT GCCATTTGTC ATGATGGAAA AGCACACTTT CCTCGTGAAN GTGTCTTTGT
            841 TTCAAATGNC ACACACTGNT TTGTAACACA AAGGAATTTT TATGAACCAC NAATCATTAC
            901 TACAGANAAC ACATTTGTGT CTGGNANNTG TGANGTTGTA ANNNNNATTG TCNNCNACNC
            961 AGTTTANNAT CCTTTGCNNC CTGAATTANN NNCNTTCNNN NNNNANNNAG NNAANNATTT
          1021 TNNNNNNCAT ACNTCNNNNN NNNNN
          //
          Primer: SARS-CoV-2_24599F (Pr1157)
          Region: insert CDS: 3080nt-3785nt
          Sequence file: RDB19551_B2C7i.seq check
          >19551_B2C7F_2_SARS-CoV-2_24599F_C02_03_ABI08.ab1
              1 NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN CTTGCTGCTN CTAAAATGTC AGAGTGTGTA
             61 CTTGGACAAT CAAAAAGAGT TGATTTTTGT GGAAAGGGCT ATCATCTTAT GTCCTTCCCT
            121 CAGTCAGCAC CTCATGGTGT AGTCTTCTTG CATGTGACTT ATGTCCCTGC ACAAGAAAAG
            181 AACTTCACAA CTGCTCCTGC CATTTGTCAT GATGGAAAAG CACACTTTCC TCGTGAAGGT
            241 GTCTTTGTTT CAAATGGCAC ACACTGGTTT GTAACACAAA GGAATTTTTA TGAACCACAA
            301 ATCATTACTA CAGACAACAC ATTTGTGTCT GGTAACTGTG ATGTTGTAAT AGGAATTGTC
            361 AACAACACAG TTTATGATCC TTTGCAACCT GAATTAGACT CATTCAAGGA GGAGTTAGAT
            421 AAATATTTTA AGAATCATAC ATCACCAGAT GTTGATTTAG GTGACATCTC TGGCATTAAT
            481 GCTTCAGTTG TAAACATTCA AAAAGAAATT GACCGCCTCA ATGAGGTTGC CAAGAATTTA
            541 AATGAATCTC TCATCGATCT CCAAGAACTT GGAAAGTATG AGCAGTATAT AAAATGGCCA
            601 TGGTACATTT GGCTAGGTTT TATAGCTGGC TTGATTGCCA TAGTAATGGT GACAATTATG
            661 CTTTGCTGTA TGACCAGTTG CTGTAGTTGT CTCAAGGGCT GTTGTTCTTG TGGATCCTGC
            721 TGCAAATTTG ATGAAGACGA CTCTGANCCA GTGCTCAAAG GAGTCAAATT ACATTACACA
            781 TAAGGTATCG ATAAGCTTGA TATCGAATTC CTGCAGCCCG GGGGANCCAC TAGTTCTAGA
            841 GCGGCCGCCA CCGCGGNGGA NCTCCAGCTT TTGTTCCCTT TAGTGANGGN TAANTNGCGC
            901 GCTTGNNGNA ATCATGGTCA NAGCTGTTNN CNGNGTNNAA TTGNTATCCG CTCNCANTTN
            961 CNCACNANNT ACNANCCNGA NNCATAAAGN GNNAAAGNCN GGGGGNGNCT NNNGANTGAN
           1021 CNNACNNNNN NTANTNGCGT NGNNNNNNNN GNCNNNCTTT NCAGTNNGNA ANNNNNNNNN
          1081 N
          //

          Please visit Sequencing and PCR primers for primer information.


          References

          Original, user report and related articles


          2023.05.01

          GNP_filter3_RDBDEP_html_230501.pl