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pKM2L-phOAT

Promoter Bank clone, Human ornithine aminotransferase (OAT) promoter

Catalog number RDB05513
Resource name pKM2L-phOAT
Alternative name p1927-13F
Clone info. PCR amplified human ornithine aminotransferase (OAT) promoter sequence was inserted into a Renilla luciferase reporter vector pKM2L (RDB04026). Genomic sequence from 91451 to 90009 of AL445237.16 (reverse direction) corresponding -1407 to +36 (the transcription start site is designated +1. Fig.1 of Engelhardt, J.F. J. Biol. Chem. 266 (2), 752-758, 1991) is cloned. Alternatively, 124420331 to 124418889(NC_000010.11); relatively -1355 to +88, where +1 corresponds to 1 nt of NM_000274.3 was cloned.
Comment PCR cloning, forward primer, 1927 F2: 5' tccagctccttcccatgcagttgct 3'; reverse primer, 1927 R2: 5' acaaccgggtacacgcggcgtctat 3' Entire sequence of promoter region has not been confirmed.
Vector backbone pKM2L (RDB04026) (Plasmid)
Size of vector backbone 4.2 kb
Selectable markers Kan^r
Gene/insert name Human ornithine aminotransferase (gyrate atrophy) genomic DNA
Depositor|Developer DNA Bank, |
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External Database
Human ornithine aminotransferase (gyrate atrophy)

          Reference sequence
            AL445237

          Distribution information

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          RDB05513 pKM2L-phOAT DNA solution

          Please review the QC test results indicated by check icon below as well as clone information before placing your order.

          References and tips

          Electronic file

          Original reference

          Further references such as user reports and related articles (go to bottom)

          Featured content

          Featured content Promoter Collection (Renilla Luciferase) (English text)

          Sequence information

          RIKEN BRC has sequenced portions of this material for quality test.
          Please review the QC test results indicated by check icon as well as clone information before placing your order.

          Test sheet RDB05513_A6Iup1.pdf check

          Nucleotide sequence of a portion of this resource (if available).

          Primer: M13_-40
          Sequence file: RDB05513_A6Iua.seq check
          >05513_05513_A6Iu_M13(-40)_D04_10_ABI24.ab1
              1 AGCAGTCAGC TTGCATGCCT GCAGGTCATT TAAATAGGGA TAACAGGGTA ATGATTAAGA
             61 TCTCGAGCTC TAAGCTTCAC ATATGCATGC ACTAGTGGCT CCAGCTCCTT CCCATGCAGT
            121 TGCTGATGAC TTTGGTGACC AGATAGCCTT TCCCACACTC CTCTCTTTGG GTTCTGGAAT
            181 TCTGGAAACC CCACTTGGAG GCCGTTGGGC CTAGGATGGA TAATGGCCCT CGCTGGTGCA
            241 TGAGACCCAG GTTATTTCTC CATCCCTTGT GGTTTACTTG CCTACATTGA TTGATTGATT
            301 GGTTGATTAA GATGGTCTTG CTTTGTTGCC CAGGCTGGAG TGCAGTGGTG CAGTCATAGG
            361 TCACTGCAGC CTCAACCTCC TGGGCTCAAG TGATCCTCCC ACCTCAGCCT TTGGAGTAGC
            421 TGGGAACATA GGTGTGCCAC CACACCAGAT TAATTTTTAT TTTTTTTTGT GGAGACGGGG
            481 TCTCACTGTG TCGCCCAGGC TGGTCTGGAA CTCCTGGGAT CAAGCAATCC TCCTGCCTCG
            541 GTCTGCCAAA GTGCTGGGAT TACAGGCATG AACCACGGGC CCCCACCACC ACGTTTTAGG
            601 AAATGTTCAC ATTGGAGTGT GCCCTCTGTT TCCAGCTGGG CCCCCGACTG GTCATTGTGG
            661 TCTAATGGAG TGTGGTGCCG GCAGCTGCCA GCGCCTGCCC TCTGAGAGGG GTGGCGAGGG
            721 GCACACAGGA CCAGACTGCC CCTACTGTTG GATGACTGGG TAAGTCGCTT TCCTTCTCTG
            781 GGTCTCTGTT TTCCAATATT TAACATCTTG TTGTGGGCTA AGTGAAGTCC AAGTCCCTTC
            841 CGATTCTAAC ATGAGGTTGT CCCGGAATAT CTATTTTGTG TTCTGAATTT AATAACCGGC
            901 TGTGGAGGGC ACCACAGGCA AATCTGTACT GTGAGTGGGT TGCTGCCACT CAATTATCTG
            961 ACAGCAGCTG CGAACAGGTG GGCAGTGTGT TTTCCATAGG CAGCGACGAC TTTTGGGAGG
           1021 TGGATTCAGA GGCACAACTA AGCCGCCGCG GCGCATCAAG ATCAAGGGCA TGAGCTCCCG
          1081 CAGCTGTGCT GGAGCCAGAA GCTGGGGGCC TGATCCCTCC CCTTCCAGGG AGCAC
          //
          Primer: phRLR2
          Sequence file: RDB05513_A6Iub.seq check
          >05513_05513_A6Iu_phRLR2_E04_13_ABI24.ab1
              1 AACTCCTGTC TCGACAGCCC AGTTTCTATT GGTCTCCTTA AACCTGTCTT GTAACCTTGA
             61 TACTTACCTG CCCAGTGCCT CACGACCAAC TTCTGCAGTA CCCGGGTGAA TTCTACGCGT
            121 CGACAGGCAC AACCGGGTAC ACGCGACGTC TATGAAGCGC AACAGTGACG CCGGAGCGTC
            181 ACTGCAACTT AAAGGCTGAT TCTGCCCCGC CCCCAAGACA CCCTCGCCGC TCATTGGCTG
            241 GGGCGGAGGG CAGGATACCA ATCGCGTGGG TCCCGTCCTC CGCCCCGCCC TCCGGCCGCG
            301 CATCAAGGAT CTTTGCTCCT CCCGCGGATT CGATCCGCGC TCGCGCCTCC TGAGCCCGCC
            361 GGCCTGTACC TGAGCTCAGG CCCCTCGGTC GCCTCCTCTG GCGGGACGAG AAGAGTCCTT
            421 GTCCGCCCTT GCTGACGAGA AGACTGAGGC CCGAAAAGGA AAAGTCTGTT GGGCCCCCCA
            481 CTGCGCGGGC CGGGTGTGGC TGGAGGCCGA GAGACGTGAG GCTGGACCGC CCGCCCTGTG
            541 CTCCTGGAGG GAGGGACCAG CCCCAGCTCT GCCCCAGCCA CAGCTGCGGG AGCCCCATGC
            601 CCTTGAACCC TGATGCGCCG CGCGGCTTAG TTGTGCCTCT GAATCCACCT CCAAAAGTCG
            661 TCGCTGCCTA TGGAAAACAC ACTGCCCACC TGTTCGCAGC TGCTGTCAGA TAATTGAGTG
            721 GCAGCAACCC ACTCACAGTA CAGATTTGCC TGTGGTGCCC TCCACAGCCG GTTATTAAAT
            781 TCAGAACACA AAATAGATAT TCCGGGACAA CCTCATGTTA GAATCGGAAG GGACTTGGAC
            841 TTCACTTAGC CCACAACAAG ATGTTAAATA TTGGAAAACA GAGACCCAGA GAAGGAAAGC
            901 GACTTACCCA GTCATCCAAC AGTAGGGGCA GTCTGGTCCT GTGTGCCCCT CGCCACCCCT
            961 CTCAGAGGGC AGGCGCTGGC AGCTGCCGGC ACCACACTCC ATTAGACCAC AATGACCAGT
           1021 CGGGGGCCCA GCTGGGAAAC AGAGGCACAC TCCAATGTGA ACATTTCCTA AAACGTTGAT
           1081 GTTGGGGGGC CCGTGGATCA ATGCGTGTAT CCCAAGCACT TTGGCAGACG AAGTAGGAGG
          1141 AATTGGCCTT GGAATT
          //
          Primer: pAxCALNL_F1
          Sequence file: RDB05513_A6Iuc.seq check
          >05513_05513_A6Iu_pAxCALNL_F1_F04_16_ABI24.ab1
              1 ACAATCTATC TTATCATGTC TGCTCGAAGC GGCCGCTCTA GAATTACTGC TCGTTCTTCA
             61 GCACGCGCTC CACGAAGCTC TTGATGTACT TACCCATTTC ATCTGGAGCG TCCTCCTGGC
            121 TGAAGTGGAG GCCCTTCACC TTCACGAACT CGGTGTTAGG GAACTTCTTA GCTCCCTCGA
            181 CAATAGCGTT GGAAAAGAAC CCAGGGTCGG ACTCGATGAA CATCTTAGGC AGATCGTCGC
            241 TGGCCCGAAG GTAGGCGTTG TAGTTGCGGA CAATCTGGAC GACGTCGGGC TTGCCTCCCT
            301 TAACGAGAGG GATCTCGCGA GGCCAGGAGA GGGTAGGCCG TCTAACCTCG CCCTTCTCCT
            361 TGAATGGCTC CAGGTAGGCA GCGAACTCCT CAGGCTCCAG TTTCCGCATG ATCTTGCTTG
            421 GGAGCATGGT CTCGACGAAG AAGTTATTCT CAAGCACCAT TTTCTCGCCC TCTTCGCTCT
            481 TGATCAGGGC GATATCCTCC TCGATGTCAG GCCACTCGTC CCAGGACTCG ATCACGTCCA
            541 CGACACTCTC AGCATGGACG ATGGCCTTGA TCTTGTCTTG GTGCTCGTAG GAGTAGTGAA
            601 AGGCCAGACA AGCCCCCCAG TCGTGGCCCA CAAAGATGAT TTTCTTTGGA AGGTTCAGCA
            661 GCTCGAACCA AGCGGTGAGG TACTTGTAGT GATCCAGGAG GCGATATGAG CCATTCCCGC
            721 TCTTGCCGGA CTTACCCATT CCGATCAGAT CAGGGATGAT GCATCTAGCC ACGGGCTCGA
            781 TGTGAGGCAC GACGTGCCTC CACAGGTAGC TGGAGGCAGC GTTACCATGC AGAAAAATCA
            841 CGGCGTTCTC GGCGTGCTTC TCGGAATCAT AGTAGTTGAT GAAGGAGTCC AGCACGTTCA
            901 TTTGCTTGCA GCGAGCCCAC CACTGAGGCC CAGTGATCAT GCGTTTGCGT TGCTCGGGGT
            961 CGTACACCTT GGAAAGCCAT GGGTGGCTAG CCCTATAGTG AGTCGTATTA AGTACTCTAG
           1021 CCCTTAAGAG CTGTAATTTG AACTGGGGAG TGACACCTGT GGTAGAAGAA AGCAAGTCAT
           1081 GTCAGTAGAC CATAGTGCTA TCAGAACGCA GAGTCATCTC TGTCCTCCGA ACAAAGCCCA
          1141 AGT
          //

          Please visit Sequencing and PCR primers for primer information.


          References

          Original, user report and related articles

          reference Engelhardt, J.F., Transcriptional analysis of the human ornithine aminotransferase promoter. J. Biol. Chem. 266 (2): 752-758 (1991). PMID 1845993.

          2022.05.18

          GNP_filter3_RDBDEP_html_220516.pl