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pMXs-3xFLAG-KLF4(H504A)

Retroviral expression vector of human KLF4, mutant H504A.

Catalog number RDB19022
Resource name pMXs-3xFLAG-KLF4(H504A)
Clone info. Retroviral expression vector of human Kruppel like factor 4 (KLF4) mutant (H504A) tagged with 3xFLAG at N-terminus. This clone was constructed based on pMXs-3xFLAG-KLF4 (RDB19004).
Comment This clone contains a cDNA fragment corresponding to the 627nt to 2037nt of NM_004235.6 (CDS: 598nt to 2037nt) as similar as in the Cell (2007), 131 (5), 861-872. The number at the end of the clone name indicates the position of the substituted amino acid. The position of that amino acid corresponds to NP_001300981.1.
Vector backbone pMXs (plasmid)
Selectable markers Ampicillin
Gene/insert name human KLF4 cDNA
Depositor|Developer Hayashi, Yohei |
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External Database
human KLF4

          Reference sequence
            
           

          Distribution information

          Please check terms and conditions set forth by the depositor, which are specified in the RIKEN BRC Catalog and/or Web Catalog.
          Terms and conditions for distribution In publishing the research results obtained by use of the BIOLOGICAL RESOURCE, an acknowledgment to DEPOSITOR and a citation of the literature designated by the DEPOSITOR (Borisova, E. et al., iScience 25 (1): 103525 (2021)) are requested. The availability of the BIOLOGICAL RESOURCE is limited to a RECIPIENT of a not-for profit institution for a not-for-profit academic purpose.
          Additional terms and conditions:
          Regarding pMXs series vector: In publishing the research results obtained by use of the BIOLOGICAL RESOURCE, a citation of literature for pMXs, pMYs and pMZs vectors (Kitamura, T., Exp. Hematol. 31 (11): 1007-1014, 2003) and an acknowledgment to Dr. Toshio Kitamura of The Institute of Medical Science, The University of Tokyo are requested.
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          Material Transfer Agreement (MTA for use for not-for-profit academic purpose) [Word]
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          Remarks Remember that you will be working with samples containing infectious virus.
          提供案内 (日本国内) [open/close]

          提供条件 利用者は、研究成果の公表にあたって寄託者への謝辞の表明を必要とし、寄託者の指定する文献を引用すること (Borisova, E. et al., iScience 25 (1): 103525 (2021))。本件研究材料は、非営利機関の非営利学術研究に限って提供する。
          付加的提供条件:
          pMXsシリーズベクターについて:利用者は、研究成果の公表にあたって pMXs, pMYs, pMZsベクターの文献 (Kitamura, T., Exp. Hematol. 31 (11): 1007-1014, 2003) を引用し、東京大学医科学研究所 北村俊雄博士への謝辞の表明を必要とする。
          提供依頼
          提供依頼書 [Word]
          提供同意書 (MTA、非営利機関による非営利学術研究用)[Word]
          手続きの概要は、「提供申込みについて[link]」をご覧ください。
          備考 このリソースはウイルス粒子産生用のため、取扱いに注意が必要です。

          Catalog # Resource name Shipping form Fee (non-profit org.)
          RDB19022 pMXs-3xFLAG-KLF4(H504A) DNA solution

          Please review the QC test results indicated by check icon below as well as clone information before placing your order.

          How to cite this biological resource

          Materials & Methods section:

          The pMXs-3xFLAG-KLF4(H504A) was provided by the RIKEN BRC through the National BioResource Project of the MEXT, Japan (cat. RDB19022).

          Reference section:

          Borisova, E., Nishimura, K., An, Y., Takami, M., Li, J., Song, D., Matsuo-Takasaki, M., Luijkx, D., Aizawa, S., Kuno, A., Sugihara, E., Sato, T.A., Yumoto, F., Terada, T., Hisatake, K., Hayashi, Y., Structurally-discovered KLF4 variants accelerate and stabilize reprogramming to pluripotency. iScience 25 (1): 103525 (2021). PMID 35106457. [link to RRC of NBRP]

          Further references such as user reports and related articles (go to bottom)


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          QC test results

          RIKEN BRC has sequenced portions of this material for quality test.
          Please review the QC test results indicated by check icon as well as clone information before placing your order.

          Test sheet RDB19022_B1Ecp1-1.pdf check

          Nucleotide sequence of a portion of this resource (if available).

          Primer: MMLV-pol_F (Pr0352)
          Region: pol region,insert 5'(3xFLAG,hKLF4(H504A) 5')
          Sequence file: RDB19022_B1Eca.seq check
          >D07716C1_B1Ec_3_MMLV-pol_F_A01_01_ABI08.ab1
              1 NNNNNNNNNN NNNNNNNNNN NGGNNTCGNA NCTTGGNNAC NCGCCGCCCN CGTGAAGGCT
             61 GCCGACCCCG GGGGTGGACC ATCCTCTAGA CTGCCGGATC TAGCTAGTTA ATTAAGGATC
            121 CCAGTGTGGT GGTACGGGAA TTCATGGACT ACAAAGACCA TGACGGTGAT TATAAAGATC
            181 ATGACATCGA CTACAAGGAT GACGATGACA AGGCTGTCAG CGACGCGCTG CTCCCATCTT
            241 TCTCCACGTT CGCGTCTGGC CCGGCGGGAA GGGAGAAGAC ACTGCGTCAA GCAGGTGCCC
            301 CGAATAACCG CTGGCGGGAG GAGCTCTCCC ACATGAAGCG ACTTCCCCCA GTGCTTCCCG
            361 GCCGCCCCTA TGACCTGGCG GCGGCGACCG TGGCCACAGA CCTGGAGAGC GGCGGAGCCG
            421 GTGCGGCTTG CGGCGGTAGC AACCTGGCGC CCCTACCTCG GAGAGAGACC GAGGAGTTCA
            481 ACGATCTCCT GGACCTGGAC TTTATTCTCT CCAATTCGCT GACCCATCCT CCGGAGTCAG
            541 TGGCCGCCAC CGTGTCCTCG TCAGCGTCAG CCTCCTCTTC GTCGTCGCCG TCGAGCAGCG
            601 GCCCTGCCAG CGCGCCCTCC ACCTGCAGCT TCACCTATCC GATCCGGGCC GGGAACGACC
            661 CGGGCGTGGC GCCGGGCGGC ACGGGCGGAN GCCTCCTCTA TGGCAGGGAG TCCGCTCCCC
            721 CTCCGACGGC TCCCTTCNAC CTGGCGGANA TCAACGACGT GAGCCCCTCG GGCGGNTTCN
            781 TGGCCNANCT CCTGCGGCCN GAATTGGANC CGGNGTACNT TCCGCCGCAN CAGCCGCAGC
            841 CNNCAGGTGG CGGGCTGATG GGCAAGTTCG TGCTGAANGN GTCNCTGANC GCCCCTGNNN
            901 NNNAGNANGG NAGCCCGNCN GNCATCAGCG NCNNCAAAGG NAGNCCTGAN NNNNNNNNCC
            961 CNGNNNNGGN GGCGCCCNAN ANCNGCGGGN CNNCNCGNNC GTGCCNCNNG NTCANNCNNN
           1021 NNNNNGNNNN TNNNNGNNCC NNCNTNGNNN NNNGNNNCCC NNNNCNNNNN NGNNNNNGNN
          1081 NNGNNNNNNN NNN
          //
          Primer: hKLF4-mut check_R2 (Pr1009)
          Region: insert 3'(hKLF4(H504A) 3'),3' LTR
          Sequence file: RDB19022_B1Ecb.seq check
          >D07716C1_B1Ec_3_hKLF4-mut check_R2_C02_08_ABI24.ab1
              1 NNNNNNNNNN NNNNNNNNNN NNNNNNNGNT NNNNNNNNCC GGGGCCCNNT TACCCATCCT
             61 TCCTGCCCGA TCAGATGCAG CCGCAAGTCC CGCCGCTCCA TTACCAAGAG CTCATGCCAC
            121 CCGGTTCCTG CATGCCAGAG GAGCCCAAGC CAAAGAGGGG AAGACGATCG TGGCCCCGGA
            181 AAAGGACCGC CACCCACACT TGTGATTACG CGGGCTGCGG CAAAACCTAC ACAAAGAGTT
            241 CCCATCTCAA GGCACACCTG CGAACCCACA CAGGTGAGAA ACCTTACCAC TGTGACTGGG
            301 ACGGCTGTGG ATGGAAATTC GCCCGCTCAG ATGAACTGAC CAGGCACTAC CGTAAACACA
            361 CGGGGCACCG CCCGTTCCAG TGCCAAAAAT GCGACCGAGC ATTTTCCAGG TCGGACGCCC
            421 TCGCCTTACA CATGAAGAGG CATTTTTAAG CGGCCGCCAG CACAGTGGTC GACGATAAAA
            481 TAAAAGATTT TATTTAGTCT CCAGAAAAAG GGGGGAATGA AAGACCCCAC CTGTAGGTTT
            541 GGCAAGCTAG CTTAAGTAAC GCCATTTTGC AAGGCATGGA AAAATACATA ACTGAGAATA
            601 GAGAAGTTCA GATCAAGGTC AGGAACAGAT GGAACAGCTG AATATGGGCC AAACAGGATA
            661 TCTGTGGTAA GCAGTTCCTG CCCCGGCTCA NGGCCAAGAA CAGATGGAAC AGCTGAATAT
            721 GGGCCAAACA GGATATCTGT GGTAAGCAGT TCCTGCCCCG GCTCANGGCC AAGAACAGAT
            781 GGTCCCCAGA TGCGGTCCAG CCCTCAGCAG TTTCTAGAGA ACCATCANAN GTTTNCNGGG
            841 NGCCCCNAGG ACCTGAAATG ANCCTGTGCC NTATTTGAAC TANCCNANCA NTTCGCTTCN
            901 CGCTTCTGTT CNCGCGCTNC NGNNCCCCNA NNTNNNTAAA AGANCCNNNN ACCCNNCACT
          961 CNGGGNNNNC NNNNNNNNNN
          //
          Primer: pMXs-3LTRup_R2 (Pr0365)
          Region: insert mid(hKLF4(H504A) mid)
          Sequence file: RDB19022_B1Ecc.seq check
          >D07716C1_B1Ec_3_pMXs-3LTRup_R2_B08_05_ABI24.ab1
              1 NNNNNNNNNN NNNNNNNNNN NNNNNCGTCN NNNNCTGNGC TGGCGGCCGC TTAAAANTGC
             61 CTCTTCNTGT GTAANGCGAG GGCGTCCGAC CTGGAAAATG CTCGGTCGCA TTTTTGGCAC
            121 TGGAACGGGC GGTGCCCCGT GTGTTTACGG TAGTGCCTGG TCAGTTCATC TGAGCGGGCG
            181 AATTTCCATC CACAGCCGTC CCAGTCACAG TGGTAAGGTT TCTCACCTGT GTGGGTTCGC
            241 AGGTGTGCCT TGAGATGGGA ACTCTTTGTG TAGGTTTTGC CGCAGCCCGC GTAATCACAA
            301 GTGTGGGTGG CGGTCCTTTT CCGGGGCCAC GATCGTCTTC CCCTCTTTGG CTTGGGCTCC
            361 TCTGGCATGC AGGAACCGGG TGGCATGAGC TCTTGGTAAT GGAGCGGCGG GACTTGCGGC
            421 TGCATCTGAT CGGGCAGGAA GGATGGGTAA TTGGGCCCCG GGTGGGGATG GAAGCCGGGA
            481 GGAAGCGGCA GGGCAGGGTG ACAGTCCCTG CTGCTCAGCA CTTCCTCAAG ACCCAGGGTC
            541 NNNNNNGTCC TGCTGGGGAG CTGCCGCCCC AGGGGGAAGT CGTGTGCAGC CGGCCGGTGG
            601 CCATTGCTGA GAGGGGGTCC AGCGCCCAAG TGGGTGCACG AAGAGACCGC CTCCTGCTTG
            661 ATCTTGGGGC ACGTGCGCGG CGGCCCGCCG NTGTANGGCG CCACCACCAC CGGGTGGCTG
            721 CCGTCAGGGC TGCCTTTGCT GANGCTGATG ACCGACGGGC TGCCGTACTC GCTGCCAGGG
            781 GCGCTCAGCG ACGCCTTCAG CACGAACTTG CCCNATCAGC CCGCCACCTG NCGGCTGCGG
            841 CTGCTGCNGC GNAATGTACA CCNGGGTCCA ATTNTGGCCG CANGANCNCG GCCNCGANNC
            901 CGCCNNANGG GGCNCACNNC NNTNNANGTC CGCCANGNNN GAANNNNANC NNNNNGNNNG
          961 GGGNNCNNNN NNCCNNNNNN NNNN
          //
          Primer: gag-N_R (Pr0745)
          Region: MMLV psi,5' LTR
          Sequence file: RDB19022_B1Ecd.seq check
          >D07716C1_B1Ec_3_gag-N_R_C08_08_ABI24.ab1
              1 NNNNNNNNNN NNNNNNNNNN NNNNNNNNNT TTNNGANNAA TANCNGAAAN CACAGTCAGA
             61 CAGANACNNA CACAGAACGN NNNNNTGCAG CAGACAAGAC GCGCGGCGCG GCTTCGGTCC
            121 CAAACCGAAA GCAAAAATTC AGACGGAGGC GGGAACTGTT TTAGGTTCTC GTCTCCTACC
            181 AGAACCACAT ATCCCTCCTA TTAGGGGGGT GCACCAAAGA GTCCAAAACG ATCGGGATTT
            241 TTGGACTCAG GTCGGGCCAC AAAAACGGCC CCCGAAGTCC CTGGGACGTC TCCCAGGGTT
            301 GCGGCCGGGT GTTCCGAACT CGTCAGTTCC ACCACGGGTC CGCCAGATAC AGAGCTAGTT
            361 AGCTAACTAG TACCGACGCA GGCGCATAAA ATCAGTCATA GACACTAGAC AATCGGACAG
            421 ACACAGATAA GTTGCTGGCC AGCTTACCTC CCGGTGGTGG GTCGGTGGTC CCTGGGCAGG
            481 GGTCTCCCGA TCCCGGACGA GCCCCCAAAT GAAAGACCCC CGCTGACGGG TAGTCAATCA
            541 CTCAGAGGAG ACCCTCCCAA GGAACAGCGA GACCACAAGT CGGATGCAAC TGCAAGAGGG
            601 TTTATTGGAT ACACGGGTAC CCGGGCGACT CAGTCAATCG GAGGACTGGC GCGCCGAGTG
            661 AGGGGTTGTG GGCTCTTTTA TTGAGCTCGG GGAGCAGAAG CGCGCGAACA GAAGCGAGAA
            721 GCGAACTGAT TGGTTAGTTC AAATAAGGCA CANGGTCATT TCANGTCCTT GGGGCANCCT
            781 GGAANCATCT GATGGTTCTC TANAAACTGC TGANGGCTGG ACCGCATCNG GGGGANCATC
            841 TGTTCTTGGC CNNGANNCNG GGGCANGAAC TGCNTNACCA NNGATATCCN GNTTNGNNCN
            901 NTATTCNNCT NNNCCATCTG TTCNTNGNNC NNNANNNGGG NNNNNNNANN GCTNANNNCN
          961 NNNNNNNNN
          //
          Primer: lacIpro-B_F (Pr0724)
          Region: 3' LTR
          Sequence file: RDB19022_B1Ece.seq check
          >D07716C1_B1Ec_3_lacIpro-B_F_D01_04_ABI08.ab1
              1 NNNNNNNNNN NNNNNNNNNN ANNNNNNNNN NNCNNNGAGC GAGGAAGCGG AAGANCGCCC
             61 AATACGCAAA CCGCCTCTCC CCGCGCGTTG GCCGATTCAT TAATGCAACT ATGGCCATTT
            121 AATGTAAATA CTTAAGAAAA AAAACCAAAT TAATTTTGAT ACATGCTGCA TGTGAAAGAC
            181 CCCCGCTGAC GGGTAGTCAA TCACTCAGAG GAGACCCTCC CAAGGAACAG CGAGACCACA
            241 AGTCGGATGC AACTGCAAGA GGGTTTATTG GATACACGGG TACCCGGGCG ACTCAGTCAA
            301 TCGGAGGACT GGCGCCCCGA GTGAGGGGTT GTGGGCTCTT TTATTGAGCT CGGGGAGCAG
            361 AAGCGCGCGA ACAGAAGCGA GAAGCGAACT GATTGGTTAG TTCAAATAAG GCACAGGGTC
            421 ATTTCAGGTC CTTGGGGCAC CCTGGAAACA TCTGATGGTT CTCTAGAAAC TGCTGAGGGC
            481 TGGACCGCAT CTGGGGACCA TCTGTTCTTG GCCCTGAGCC GGGGCAGGAA CTGCTTACCA
            541 CAGATATCCT GTTTGGCCCA TATTCAGCTG TTCCATCTGT TCTTGGCCCT GAGCCGGGGC
            601 AGGAACTGCT TACCACAGAT ATCCTGTTTG GCCCATATTC AGCTGTTCCA TCTGTTCCTG
            661 ACCTTGATCT GAACTTCTCT ATTCTCAGTT ATGTATTTTT CCNTGCCTTG CAAAATGGCG
            721 TTACTTAAGC TAGCTTGCCA AACCTACAGG TGGGGTCTTT CATTCCCCCC TTTTTCTGGA
            781 GACTAAATNA AANTCTTTTA TTTTATCGTC NACCACTGNG CTGGCGGNNN CTTAAAAATG
            841 CCTCTTCATG TGTANGCGAG GGCNNNCGAC CTNNNAATGN TCGGTCGNNT TTTTGNNACT
            901 GNAACGGGCG GNGCCCCNNG NGTTTACGGN AGNGNCTGGN CAGTTCNTCN NANCGGGNCN
            961 AATTTNCNTC CNNANNCGTC CCANNCNCAG NGGNAANGGN TNNTCNNCNG TGNGGGNTCN
           1021 NNNNNGNNNC NTGNNNANNG GANNNNNNNT NNGNNNNTTT TGNNNNNNNC CNNNNNNANN
           1081 NNNNANNGNG GNNNGNNGGT NNNTTTNCNN GGNNNNNNNN NCNNNNNNNN CCNNNNNNTT
          1141 NNNNNNNNNN
          //

          Please visit Sequencing and PCR primers for primer information.


          References

          Original, user report and related articles

          original Borisova, E., Structurally-discovered KLF4 variants accelerate and stabilize reprogramming to pluripotency. iScience 25 (1): 103525 (2021). PMID 35106457. [link to RRC of NBRP]

          2023.08.29

          GNP_filter3_RDBDEP_html_230702.pl