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SEREX clone BRC-Co-4 #1

SEREX clone BRC-Co-4 #1

Catalog number RDB04481
Resource name SEREX clone BRC-Co-4 #1
Clone info. SEREX clone BRC-Co-4, clone 1 from Colon Cancer AGH-CO-2. Reactivity: +. Corresponding gene: Suppression of Tumorigenesity 13 (colon carcinoma) (Hsp70 interacting Protein) (ST13) (NM_003932, 3214 bp).
Comment Similar clone: NY-REN-33 (ID 442), similarity: NY-REN-33 (ID 442) 99% similarity. UniGene cluster: , Ubiquitous. Nucleoide position 36 and later of NM_003932 is cloned.
Vector backbone pBK-CMV (Plasmid)
Size of vector backbone 4.5 kb
Selectable markers Kan^r
Gene/insert name Human Suppression of Tumorigenesity 13 (colon carcinoma) (Hsp70 interacting Protein) (ST13) (NM_003932, 3214 bp) cDNA
Depositor|Developer Obata, Yuichi |
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External Database
Human Suppression of Tumorigenesity 13 (colon carcinoma) (Hsp70 interacting Protein) (ST13) (NM_003932, 3214 bp)

          Reference sequence
            
           

          Distribution information

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          RDB04481 SEREX clone BRC-Co-4 #1 DNA solution

          Please review the QC test results indicated by check icon below as well as clone information before placing your order.

          How to cite this biological resource

          Materials & Methods section:

          The SEREX clone BRC-Co-4 #1 was provided by the RIKEN BRC through the National BioResource Project of the MEXT, Japan (cat. RDB04481).

          Reference section:

          Further references such as user reports and related articles (go to bottom)


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          QC test results

          RIKEN BRC has sequenced portions of this material for quality test.
          Please review the QC test results indicated by check icon as well as clone information before placing your order.

          Test sheet RDB04481_B2Kop1-1.pdf check

          Nucleotide sequence of a portion of this resource (if available).

          Primer: CMV_Forward (Pr0016)
          Region: CMV pro,lacO,T3 pro,insert 5'
          Sequence file: RDB04481_B2Koa.seq check
          >04481_04481_B2Ko_3_CMV-Forward_B01_04_ABI24.ab1
              1 NNNNNNNNNN NTNNNNNNNN TGGGCGGTAG GCGTGTACGG TGGGAGGTCT ATATAAGCAG
             61 AGCTGGTTTA GTGAACCGTC AGATCCGCTA GCCGCAATTA CTGTGAGTTA GCTCACTCAT
            121 TAGGCACCCC AGGCTTTACA CTTTATACTT CCGGCTCGTA TATTGTGTGG AATTGTGAGC
            181 GGATAACAAT TTCACACAGG AAACAGCTAT GACCTTGATT ACGCCAAGCT CGAAATTAAC
            241 CCTCACTAAA GGGAACAAAA GCTGGAGCTC GCGCGCCTGC AGGTCGACAC TAGTGGATCC
            301 AAAGAATTCG GCACGAGGCT GTTCTGTCTT GCGGCAGCCG CCCCCTTCTG CGCGGTCACG
            361 CCGAGCCAGC GCCTGGGCCT GGAACCGGGC CGTAGCCCCC CCAGTTTCGC CCACCACCTC
            421 CCTACCATGG ACCCCCGCAA AGTGAACGAG CTTCGGGCCT TTGTGAAAAT GTGTAAGCAG
            481 GATCCGAGCG TTCTGCACAC CGAGGAAATG CGCTTCCTGA GGGAGTGGGT GGAGAGCATG
            541 GGTGGTAAAG TACCACCTGC TACTCAGAAA GCTAAATCAG AAGAAAATAC NAAGGAAGAA
            601 AAACCTGATA GTAAGAAGGT GGAGGAAGAN TTAAAGGCAG ACGAACNNTC AAGTGAGGAA
            661 AGTGNNCTAG AAANTGANNA NNNNNNGNGA NNGNNNNNGA NNCTNNNGCT NNNNNNNAAN
          721 NNGNNNNNNN AANNNNNNNN NN
          //
          Primer: SV40polyA-R (Pr0109)
          Region: T7 pro,insert 3'
          Sequence file: RDB04481_B2Kob.seq check
          >04481_04481_B2Ko_3_SV40polyA_R_D01_10_ABI24.ab1
              1 NNNNNNNNNN NNNNNNNNNN NNNNNNNNNC TCTACNAATG TGGTATGGCT GANNNNNATC
             61 ATGAACAGAC TGTGAGGACT GAGGGGCCTG AAATGAGCCT TGGGACTGTG AATCTAAAAT
            121 ACACAAACAA TTAGAATCAG TAGTTTAACA CATTATACAC TTAAAAATTG GATCTCCATT
            181 CGCCATTCAG GCTGCGCAAC TGTTGGGAAG GGCGATCGGT GCGGGCCTCT TCGCTATTAC
            241 GCCAGCTGGC GAAAGGGGGA TGTGCTGCAA GGCGATTAAG TTGGGTAACG CCAGGGTTTT
            301 CCCAGTCACG ACGTTGTAAA ACGACGGCCA GTGAATTGTA ATACGACTCA CTATAGGGCG
            361 AATTGGGTAC ACTTACCTGG TACCCCACCC GGGTGGAAAA TCGATGGGCC CGCGGCCGCT
            421 CTAGAAGTAC TCTCGAGTTT TTTTTTTTTT TTTTTTTTTT TTTTTTNNNN ANNANGANTT
            481 TNACTTTNAC CCNNTTNNGN NAANATTTGC AATATNNNAA NATANTTAGG TTAAATAAAT
            541 CAAATAAGGA ATCCNNAANA ANNNGNNCTN GAGTTAAGCC AAGTACNCNN NGGCNATTTC
            601 NAGAAAGGAN AANTCNNCNC NTTANNNAAA NANCNCNCNA GCTCAAANGN NNNTTTATNT
            661 GGNGANNGNT TTTNNNNNGN NTTNNAAANN CNNGNNNCNT CNNCANANNN NNNTTTNCNC
          721 NTTNNNNNNA NNANNNNNNN NTNNNNNNNN NN
          //
          Primer: ST13-B_F (Pr1258)
          Region: insert mid
          Sequence file: RDB04481_B2Koc.seq check
          >04481_04481_B2Ko_3_ST13-B_F_E01_05_ABI08.ab1
              1 NNNNNNNNNN NNNNTTTNCN NGGGGAANGC CTGGTAATTT TCCCGGAGGA ATGCCTGGAA
             61 TGGGAGGGGG CATGCCTGGA ATGGCTGGAA TGCCTGGACT CAATGAAATT CTTAGTGATC
            121 CAGAGGTTCT TGCAGCCATG CAGGATCCAG AAGTTATGGT GGCTTTCCAG GATGTGGCTC
            181 AGAACCCAGC AAATATGTCA AAATACCAGA GCAACCCAAA GGTTATGAAT CTCATCAGTA
            241 AATTGTCAGC CAAATTTGGA GGTCAAGCGT AATGTCCTTC TGATAAATAA AGCCCTTGCT
            301 GAAGGAAAAG CAACCTAGAT CACCTTATGG ATGTCGCAAT AATACAAACC AGTGTACCTC
            361 TGACCTTCTC ATCAAGAGAG CTGGGGTGCT TTGAAGATAA TCCCTACCCC TCTCCCCCAA
            421 ATGCAGCTGA AGCATTTTAC AGTGGTTTGC CATTAGGGTA TTCATTCAGA TAATGTTTTC
            481 CTACTAGGAA TTACAAACTT TAAACACTTT TTAAATCTTC AAAATATTTA AAACAAATTT
            541 AAAGGGCCTG TTAATTCTTA TATTTTTCTT TACTANTCNT TTTGGANTTT TTTCTTTGAA
            601 TTATTGNCAN GGAATATACT TATGTATGGN AGANTACTGN TCTGANTGNA ATAAAAGTNA
          661 TTANNGCGAN GNAAANNNNN NTNNNTTNNN NNNNAANTTN GNGNNNNNNN NNN
          //
          Primer: Poly(A) region primer #0 (Pr1055)
          Region: insert mid
          Sequence file: RDB04481_B2Kod.seq check
          >04481_04481_B2Ko_3_poly(A)region#0_G01_07_ABI08.ab1
              1 NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NATTAGAATA NAATTAGGTT AAATAAATCA
             61 AATAAGGAAT CCAGAAGAAA CTGTTCTTGA GTTAAGCCAA GTACACACTG GCAATTTCGA
            121 GAAAGGAGAA CTCTACACAT TAACAAAAGA ACACACAAGC TCAAATGCAA GTTTATATGG
            181 TGAGTGTTTT TAAAGGATTT AAAAAGCATG CTCCATCAGC ATAATAGCTT TTTCTCATTT
            241 ATGTAACAGA TGCATTTCTG TCTGCTTGTG TACAGCAAAG GGTTAGAACC TGAATAAACT
            301 TATTTATGAT TTCAGAAATG TGGTATTTTA GAAATGTACT CCATAGAATT TACTTCACTG
            361 CTCCTACCAC TGATTCTTCA AATAAGCAAA GTACAGAAGG CCTTATCCCT TGAAAATGTT
            421 TTTAAACACT ANCACTTTAA ATTGAAACAC TGGTAGAAAC GTAGCAATGT CAGGTACAAT
            481 GCCTATACTT AGTCTTATTT AAAATAAGAA TTGAATGCAC AACAGAAAAT TTATCATTTT
            541 CTTTATCATT GGAGGGGAGG GAAAGAAAGC AAGCAGAGGT GGGGATATAG TTACACTATT
            601 TAAGAGCTGA ATACAAAGAC AATGAGTCTT TCATAGTCTC AACAACTCCA CAATGAATAA
            661 CTGTGGATTA TCTCATTTAT AATTCACATT GGATAAAAAA AATCGGTTCC CCTCTGTGTG
            721 TATCAATTTA ATTCAAACCT TATCTTCAGA ATACANAGAN GANNACTACA AGANAAACTA
            781 ACTGCNATAG GTTTTTCTAA GTANAAGANC NAACANNNAA GGGAATNCCN TCTTTCCAAT
            841 GTCTTCTGAN AAGGNAAGAN TTTGNNNNAA NNNNAANTCT NACNCTNNAA NNANCATTCT
            901 CNNNGNCNNN NTAANAAACT ACNNTTGNTG TGGNNATTAC CCTACNNTTA CCNTATGNNT
            961 NACNTATTNN NNTNAACNCN NCNNTNNNNN GNNNNNNNNN ANNANNNNNT NNNNANGANN
          1021 NNNNNANNNN NNNNNN
          //
          Primer: SV40pro_ori_F (Pr0731)
          Region: SV40 pro_ori,NeoR_KanR
          Sequence file: RDB04481_B2Koe.seq check
          >04481_04481_B2Ko_3_SV40pro_ori_F_F01_16_ABI24.ab1
              1 NNNNNNNNNN CGNNGCCGCC TCNNCCTCTG ANCTATTCCN GAAGTAGTGA GGAGGCTTTT
             61 TTGGAGGCCT AGGCTTTTGC AAAGATCGAT CAAGAGACAG GATGAGGATC GTTTCGCATG
            121 ATTGAACAAG ATGGATTGCA CGCAGGTTCT CCGGCCGCTT GGGTGGAGAG GCTATTCGGC
            181 TATGACTGGG CACAACAGAC AATCGGCTGC TCTGATGCCG CCGTGTTCCG GCTGTCAGCG
            241 CAGGGGCGCC CGGTTCTTTT TGTCAAGACC GACCTGTCCG GTGCCCTGAA TGAACTGCAA
            301 GACGAGGCAG CGCGGCTATC GTGGCTGGCC ACGACGGGCG TTCCTTGCGC ANCTGTGCTC
          361 GACGTTGNCN CTGANNCGNN NNNNNACTGN NNGCNATTGN NNNANNNNNN NNNN
          //

          Please visit Sequencing and PCR primers for primer information.


          References

          Original, user report and related articles


          2023.05.01

          GNP_filter3_RDBDEP_html_230501.pl